Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 FLJ13224-201ENST00000313737 1514 ntBASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 AL020996.1-203ENST00000536896 2307 ntBASIC19.29■□□□□ 0.68
SLC27A1Q6PCB7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 AC009949.1-201ENST00000623048 1830 ntBASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 DDX43P3-201ENST00000441064 443 ntBASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC27A1Q6PCB7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 AC021087.4-201ENST00000563761 564 ntBASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
SLC27A1Q6PCB7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
SLC27A1Q6PCB7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC27A1Q6PCB7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
SLC27A1Q6PCB7 SIRPAP1-201ENST00000448467 1770 ntBASIC19.27■□□□□ 0.67
SLC27A1Q6PCB7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 AC079776.2-201ENST00000641154 1609 ntBASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC27A1Q6PCB7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms