Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 KRT18P65-201ENST00000439811 1286 ntBASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 RN7SL606P-201ENST00000472779 293 ntBASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 TPSP2-201ENST00000561760 610 ntBASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 MIR3180-1-201ENST00000580374 94 ntBASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 MIR3180-3-201ENST00000584616 94 ntBASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 LINC00167-201ENST00000530583 1419 ntBASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39BQ5VTQ0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 AC246785.2-201ENST00000432512 513 ntBASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TTC39BQ5VTQ0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 LINC00602-201ENST00000629776 2065 ntBASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 AC124864.1-201ENST00000623408 392 ntBASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 LINC00896-202ENST00000609602 2128 ntBASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.61■□□□□ 0.57
TTC39BQ5VTQ0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms