Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 CNN2P3-201ENST00000450201 906 ntBASIC28.98■■■□□ 2.23
SNAPC4Q5SXM2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC28.98■■■□□ 2.23
SNAPC4Q5SXM2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
SNAPC4Q5SXM2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
SNAPC4Q5SXM2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC28.98■■■□□ 2.23
SNAPC4Q5SXM2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC28.98■■■□□ 2.23
SNAPC4Q5SXM2 AL136317.3-201ENST00000618497 906 ntBASIC28.98■■■□□ 2.23
SNAPC4Q5SXM2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
SNAPC4Q5SXM2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
SNAPC4Q5SXM2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
SNAPC4Q5SXM2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC28.98■■■□□ 2.23
SNAPC4Q5SXM2 PCDHAC2-203ENST00000615316 3011 ntBASIC28.98■■■□□ 2.23
SNAPC4Q5SXM2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC28.98■■■□□ 2.23
SNAPC4Q5SXM2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
SNAPC4Q5SXM2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
SNAPC4Q5SXM2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 TIMM8BP1-201ENST00000452384 211 ntBASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 AFG3L1P-217ENST00000557444 2447 ntBASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.97■■■□□ 2.23
SNAPC4Q5SXM2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SNAPC4Q5SXM2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
SNAPC4Q5SXM2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
SNAPC4Q5SXM2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC28.96■■■□□ 2.23
SNAPC4Q5SXM2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SNAPC4Q5SXM2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SNAPC4Q5SXM2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC28.96■■■□□ 2.23
SNAPC4Q5SXM2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC28.96■■■□□ 2.23
SNAPC4Q5SXM2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC28.96■■■□□ 2.23
SNAPC4Q5SXM2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC28.96■■■□□ 2.23
SNAPC4Q5SXM2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
SNAPC4Q5SXM2 INGX-202ENST00000489074 768 ntBASIC28.96■■■□□ 2.23
SNAPC4Q5SXM2 CECR7-204ENST00000609932 568 ntTSL 2 BASIC28.96■■■□□ 2.23
SNAPC4Q5SXM2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC28.96■■■□□ 2.23
SNAPC4Q5SXM2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC28.96■■■□□ 2.23
SNAPC4Q5SXM2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.23
SNAPC4Q5SXM2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
SNAPC4Q5SXM2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC28.95■■■□□ 2.22
SNAPC4Q5SXM2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC28.95■■■□□ 2.22
SNAPC4Q5SXM2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC28.95■■■□□ 2.22
SNAPC4Q5SXM2 TFAMP1-201ENST00000412727 736 ntBASIC28.95■■■□□ 2.22
SNAPC4Q5SXM2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC28.95■■■□□ 2.22
SNAPC4Q5SXM2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC28.95■■■□□ 2.22
SNAPC4Q5SXM2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC28.95■■■□□ 2.22
SNAPC4Q5SXM2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC28.95■■■□□ 2.22
SNAPC4Q5SXM2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
SNAPC4Q5SXM2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC28.95■■■□□ 2.22
SNAPC4Q5SXM2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC28.95■■■□□ 2.22
SNAPC4Q5SXM2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
SNAPC4Q5SXM2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
SNAPC4Q5SXM2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC28.94■■■□□ 2.22
SNAPC4Q5SXM2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SNAPC4Q5SXM2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC28.94■■■□□ 2.22
SNAPC4Q5SXM2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
SNAPC4Q5SXM2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC28.94■■■□□ 2.22
SNAPC4Q5SXM2 HNRNPFP1-201ENST00000391730 1133 ntBASIC28.94■■■□□ 2.22
SNAPC4Q5SXM2 AC055876.3-201ENST00000431496 288 ntBASIC28.94■■■□□ 2.22
SNAPC4Q5SXM2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC28.94■■■□□ 2.22
SNAPC4Q5SXM2 AC138649.4-201ENST00000612222 287 ntBASIC28.94■■■□□ 2.22
SNAPC4Q5SXM2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC28.94■■■□□ 2.22
SNAPC4Q5SXM2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC28.94■■■□□ 2.22
SNAPC4Q5SXM2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 FAM207CP-201ENST00000443486 507 ntBASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 TSPY16P-201ENST00000449843 468 ntBASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 KRT8P48-201ENST00000515599 1220 ntBASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC28.93■■■□□ 2.22
SNAPC4Q5SXM2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SNAPC4Q5SXM2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
SNAPC4Q5SXM2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
SNAPC4Q5SXM2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms