Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 SAPCD2P3-201ENST00000455031 850 ntBASIC15.69■□□□□ 0.1
FREM1Q5H8C1 RNA5SP419-201ENST00000515908 135 ntBASIC15.69■□□□□ 0.1
FREM1Q5H8C1 AL160237.2-201ENST00000556165 472 ntBASIC15.69■□□□□ 0.1
FREM1Q5H8C1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 AC022898.2-201ENST00000616822 1312 ntBASIC15.68■□□□□ 0.1
FREM1Q5H8C1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 MRPL3P1-201ENST00000400109 1033 ntBASIC15.68■□□□□ 0.1
FREM1Q5H8C1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 AL591684.3-201ENST00000605187 298 ntBASIC15.68■□□□□ 0.1
FREM1Q5H8C1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 ABCD1P5-201ENST00000445663 754 ntBASIC15.68■□□□□ 0.1
FREM1Q5H8C1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
FREM1Q5H8C1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 FDX1P1-201ENST00000449115 551 ntBASIC15.67■□□□□ 0.1
FREM1Q5H8C1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 SART3-203ENST00000546611 1184 ntBASIC15.67■□□□□ 0.1
FREM1Q5H8C1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
FREM1Q5H8C1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 SIRPAP1-201ENST00000448467 1770 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms