Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC21.35■■□□□ 1.01
PDS5AQ29RF7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.35■■□□□ 1.01
PDS5AQ29RF7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.35■■□□□ 1.01
PDS5AQ29RF7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.35■■□□□ 1.01
PDS5AQ29RF7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.35■■□□□ 1.01
PDS5AQ29RF7 STK25P1-201ENST00000585406 838 ntBASIC21.35■■□□□ 1.01
PDS5AQ29RF7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PDS5AQ29RF7 AF228730.7-201ENST00000641842 219 ntBASIC21.35■■□□□ 1.01
PDS5AQ29RF7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.35■■□□□ 1.01
PDS5AQ29RF7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.35■■□□□ 1.01
PDS5AQ29RF7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDS5AQ29RF7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.35■■□□□ 1.01
PDS5AQ29RF7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
PDS5AQ29RF7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDS5AQ29RF7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDS5AQ29RF7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 MIR574-201ENST00000385209 96 ntBASIC21.34■■□□□ 1.01
PDS5AQ29RF7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 AC009113.1-201ENST00000570267 2443 ntBASIC21.34■■□□□ 1.01
PDS5AQ29RF7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDS5AQ29RF7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.33■■□□□ 1.01
PDS5AQ29RF7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.33■■□□□ 1.01
PDS5AQ29RF7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDS5AQ29RF7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDS5AQ29RF7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDS5AQ29RF7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PDS5AQ29RF7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.33■■□□□ 1.01
PDS5AQ29RF7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.33■■□□□ 1.01
PDS5AQ29RF7 AC105339.3-201ENST00000560043 636 ntBASIC21.33■■□□□ 1.01
PDS5AQ29RF7 AL589182.2-201ENST00000619332 1049 ntBASIC21.33■■□□□ 1.01
PDS5AQ29RF7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.33■■□□□ 1.01
PDS5AQ29RF7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
PDS5AQ29RF7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDS5AQ29RF7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDS5AQ29RF7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDS5AQ29RF7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.33■■□□□ 1.01
PDS5AQ29RF7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.33■■□□□ 1
PDS5AQ29RF7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
PDS5AQ29RF7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.33■■□□□ 1
PDS5AQ29RF7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PDS5AQ29RF7 BICD1-207ENST00000551848 1962 ntBASIC21.33■■□□□ 1
PDS5AQ29RF7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
PDS5AQ29RF7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
PDS5AQ29RF7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 KLF4P1-201ENST00000412782 1185 ntBASIC21.32■■□□□ 1
PDS5AQ29RF7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PDS5AQ29RF7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.32■■□□□ 1
PDS5AQ29RF7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.32■■□□□ 1
PDS5AQ29RF7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.32■■□□□ 1
PDS5AQ29RF7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PDS5AQ29RF7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.32■■□□□ 1
PDS5AQ29RF7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC21.32■■□□□ 1
PDS5AQ29RF7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.32■■□□□ 1
PDS5AQ29RF7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC21.32■■□□□ 1
PDS5AQ29RF7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.32■■□□□ 1
PDS5AQ29RF7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.32■■□□□ 1
PDS5AQ29RF7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PDS5AQ29RF7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PDS5AQ29RF7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.32■■□□□ 1
PDS5AQ29RF7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.32■■□□□ 1
PDS5AQ29RF7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PDS5AQ29RF7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
PDS5AQ29RF7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
PDS5AQ29RF7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
PDS5AQ29RF7 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms