Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
EFNB3Q15768 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EFNB3Q15768 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EFNB3Q15768 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.23■□□□□ 0.03
EFNB3Q15768 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
EFNB3Q15768 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EFNB3Q15768 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.23■□□□□ 0.03
EFNB3Q15768 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.23■□□□□ 0.03
EFNB3Q15768 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
EFNB3Q15768 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
EFNB3Q15768 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EFNB3Q15768 AC093677.2-201ENST00000600169 1863 ntBASIC15.23■□□□□ 0.03
EFNB3Q15768 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.22■□□□□ 0.03
EFNB3Q15768 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
EFNB3Q15768 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EFNB3Q15768 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
EFNB3Q15768 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.22■□□□□ 0.03
EFNB3Q15768 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
EFNB3Q15768 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.22■□□□□ 0.03
EFNB3Q15768 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EFNB3Q15768 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.22■□□□□ 0.03
EFNB3Q15768 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EFNB3Q15768 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EFNB3Q15768 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.22■□□□□ 0.03
EFNB3Q15768 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EFNB3Q15768 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.22■□□□□ 0.03
EFNB3Q15768 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EFNB3Q15768 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.22■□□□□ 0.03
EFNB3Q15768 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EFNB3Q15768 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.22■□□□□ 0.03
EFNB3Q15768 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EFNB3Q15768 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EFNB3Q15768 SLC25A6P4-201ENST00000586535 553 ntBASIC15.22■□□□□ 0.03
EFNB3Q15768 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.22■□□□□ 0.03
EFNB3Q15768 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.22■□□□□ 0.03
EFNB3Q15768 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.22■□□□□ 0.03
EFNB3Q15768 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EFNB3Q15768 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
EFNB3Q15768 AC135050.7-201ENST00000624508 2218 ntBASIC15.22■□□□□ 0.03
EFNB3Q15768 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.22■□□□□ 0.03
EFNB3Q15768 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
EFNB3Q15768 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EFNB3Q15768 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EFNB3Q15768 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EFNB3Q15768 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
EFNB3Q15768 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EFNB3Q15768 AL096828.2-201ENST00000567259 1965 ntBASIC15.22■□□□□ 0.03
EFNB3Q15768 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EFNB3Q15768 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EFNB3Q15768 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EFNB3Q15768 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EFNB3Q15768 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EFNB3Q15768 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
EFNB3Q15768 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.21■□□□□ 0.03
EFNB3Q15768 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EFNB3Q15768 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
EFNB3Q15768 AC005332.8-201ENST00000622750 2735 ntBASIC15.21■□□□□ 0.03
EFNB3Q15768 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.21■□□□□ 0.03
EFNB3Q15768 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EFNB3Q15768 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EFNB3Q15768 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EFNB3Q15768 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
EFNB3Q15768 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.21■□□□□ 0.03
EFNB3Q15768 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.21■□□□□ 0.03
EFNB3Q15768 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EFNB3Q15768 AC007967.3-201ENST00000434308 558 ntBASIC15.21■□□□□ 0.03
EFNB3Q15768 ABCD1P5-201ENST00000445663 754 ntBASIC15.21■□□□□ 0.03
EFNB3Q15768 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.21■□□□□ 0.03
EFNB3Q15768 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
EFNB3Q15768 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.21■□□□□ 0.03
EFNB3Q15768 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
EFNB3Q15768 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.21■□□□□ 0.03
EFNB3Q15768 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.21■□□□□ 0.03
EFNB3Q15768 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EFNB3Q15768 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EFNB3Q15768 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
EFNB3Q15768 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EFNB3Q15768 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.21■□□□□ 0.03
EFNB3Q15768 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EFNB3Q15768 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EFNB3Q15768 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EFNB3Q15768 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
EFNB3Q15768 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
EFNB3Q15768 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
EFNB3Q15768 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.21■□□□□ 0.03
EFNB3Q15768 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.21■□□□□ 0.02
EFNB3Q15768 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
EFNB3Q15768 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
EFNB3Q15768 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
EFNB3Q15768 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.21■□□□□ 0.02
EFNB3Q15768 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
EFNB3Q15768 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
EFNB3Q15768 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
EFNB3Q15768 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
EFNB3Q15768 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
EFNB3Q15768 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
EFNB3Q15768 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
EFNB3Q15768 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
EFNB3Q15768 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
EFNB3Q15768 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms