Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
DSC1Q08554 AC116407.2-201ENST00000613639 860 ntBASIC18.93■□□□□ 0.62
DSC1Q08554 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
DSC1Q08554 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DSC1Q08554 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.93■□□□□ 0.62
DSC1Q08554 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
DSC1Q08554 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.93■□□□□ 0.62
DSC1Q08554 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
DSC1Q08554 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DSC1Q08554 AC009949.1-201ENST00000623048 1830 ntBASIC18.93■□□□□ 0.62
DSC1Q08554 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.93■□□□□ 0.62
DSC1Q08554 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DSC1Q08554 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DSC1Q08554 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DSC1Q08554 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.92■□□□□ 0.62
DSC1Q08554 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
DSC1Q08554 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DSC1Q08554 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
DSC1Q08554 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DSC1Q08554 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.92■□□□□ 0.62
DSC1Q08554 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DSC1Q08554 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.92■□□□□ 0.62
DSC1Q08554 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.92■□□□□ 0.62
DSC1Q08554 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.92■□□□□ 0.62
DSC1Q08554 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
DSC1Q08554 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
DSC1Q08554 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DSC1Q08554 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
DSC1Q08554 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DSC1Q08554 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.91■□□□□ 0.62
DSC1Q08554 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.91■□□□□ 0.62
DSC1Q08554 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.91■□□□□ 0.62
DSC1Q08554 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
DSC1Q08554 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
DSC1Q08554 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 AC003669.1-201ENST00000334569 611 ntBASIC18.91■□□□□ 0.62
DSC1Q08554 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.91■□□□□ 0.62
DSC1Q08554 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 BX842568.4-201ENST00000421222 227 ntBASIC18.91■□□□□ 0.62
DSC1Q08554 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.91■□□□□ 0.62
DSC1Q08554 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.91■□□□□ 0.62
DSC1Q08554 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.91■□□□□ 0.62
DSC1Q08554 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.91■□□□□ 0.62
DSC1Q08554 AC092865.5-201ENST00000545435 363 ntBASIC18.91■□□□□ 0.62
DSC1Q08554 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.91■□□□□ 0.62
DSC1Q08554 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.91■□□□□ 0.62
DSC1Q08554 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
DSC1Q08554 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.91■□□□□ 0.62
DSC1Q08554 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.91■□□□□ 0.62
DSC1Q08554 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.91■□□□□ 0.62
DSC1Q08554 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.91■□□□□ 0.62
DSC1Q08554 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
DSC1Q08554 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
DSC1Q08554 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.91■□□□□ 0.62
DSC1Q08554 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DSC1Q08554 AC120498.9-201ENST00000339021 3867 ntBASIC18.91■□□□□ 0.62
DSC1Q08554 REXO1L9P-201ENST00000604264 2108 ntBASIC18.91■□□□□ 0.62
DSC1Q08554 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
DSC1Q08554 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DSC1Q08554 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DSC1Q08554 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DSC1Q08554 BX276092.7-203ENST00000637198 1536 ntBASIC18.9■□□□□ 0.62
DSC1Q08554 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DSC1Q08554 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
DSC1Q08554 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
DSC1Q08554 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.9■□□□□ 0.62
DSC1Q08554 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.9■□□□□ 0.62
DSC1Q08554 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
DSC1Q08554 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DSC1Q08554 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DSC1Q08554 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DSC1Q08554 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.9■□□□□ 0.62
DSC1Q08554 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
DSC1Q08554 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.9■□□□□ 0.62
DSC1Q08554 AC136632.2-201ENST00000512891 861 ntBASIC18.9■□□□□ 0.62
DSC1Q08554 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DSC1Q08554 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DSC1Q08554 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DSC1Q08554 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.9■□□□□ 0.62
DSC1Q08554 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms