Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 KRT8P47-201ENST00000604727 1398 ntBASIC17.27■□□□□ 0.35
PCDH1Q08174 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH1Q08174 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH1Q08174 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH1Q08174 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH1Q08174 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH1Q08174 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDH1Q08174 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDH1Q08174 OR6D1P-202ENST00000641007 5290 ntBASIC17.26■□□□□ 0.35
PCDH1Q08174 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH1Q08174 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH1Q08174 AC012317.2-201ENST00000623305 2251 ntBASIC17.26■□□□□ 0.35
PCDH1Q08174 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH1Q08174 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH1Q08174 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDH1Q08174 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH1Q08174 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDH1Q08174 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH1Q08174 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH1Q08174 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDH1Q08174 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDH1Q08174 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH1Q08174 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.26■□□□□ 0.35
PCDH1Q08174 AC092647.4-201ENST00000457211 535 ntBASIC17.26■□□□□ 0.35
PCDH1Q08174 AC068472.1-201ENST00000474589 881 ntBASIC17.26■□□□□ 0.35
PCDH1Q08174 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
PCDH1Q08174 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDH1Q08174 RN7SL850P-201ENST00000579959 291 ntBASIC17.26■□□□□ 0.35
PCDH1Q08174 AC005332.3-201ENST00000589904 676 ntBASIC17.26■□□□□ 0.35
PCDH1Q08174 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH1Q08174 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDH1Q08174 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH1Q08174 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDH1Q08174 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH1Q08174 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH1Q08174 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH1Q08174 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH1Q08174 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDH1Q08174 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH1Q08174 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH1Q08174 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH1Q08174 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH1Q08174 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH1Q08174 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH1Q08174 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH1Q08174 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH1Q08174 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH1Q08174 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH1Q08174 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH1Q08174 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH1Q08174 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCDH1Q08174 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH1Q08174 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH1Q08174 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH1Q08174 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH1Q08174 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH1Q08174 AC112698.1-201ENST00000510299 916 ntBASIC17.25■□□□□ 0.35
PCDH1Q08174 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
PCDH1Q08174 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH1Q08174 VENTXP5-201ENST00000523979 775 ntBASIC17.25■□□□□ 0.35
PCDH1Q08174 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.25■□□□□ 0.35
PCDH1Q08174 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH1Q08174 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
PCDH1Q08174 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
PCDH1Q08174 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDH1Q08174 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH1Q08174 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDH1Q08174 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH1Q08174 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH1Q08174 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH1Q08174 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH1Q08174 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCDH1Q08174 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH1Q08174 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDH1Q08174 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDH1Q08174 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH1Q08174 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH1Q08174 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH1Q08174 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDH1Q08174 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH1Q08174 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH1Q08174 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH1Q08174 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDH1Q08174 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDH1Q08174 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDH1Q08174 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDH1Q08174 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH1Q08174 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDH1Q08174 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDH1Q08174 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDH1Q08174 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH1Q08174 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH1Q08174 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH1Q08174 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDH1Q08174 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH1Q08174 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH1Q08174 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH1Q08174 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH1Q08174 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCDH1Q08174 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms