Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
RBM3P98179 AC106886.4-201ENST00000623557 2502 ntBASIC11.3□□□□□ -0.6
RBM3P98179 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC11.3□□□□□ -0.6
RBM3P98179 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RBM3P98179 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RBM3P98179 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RBM3P98179 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RBM3P98179 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RBM3P98179 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC11.3□□□□□ -0.6
RBM3P98179 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RBM3P98179 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
RBM3P98179 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RBM3P98179 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC11.29□□□□□ -0.6
RBM3P98179 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
RBM3P98179 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
RBM3P98179 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
RBM3P98179 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC11.29□□□□□ -0.6
RBM3P98179 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC11.29□□□□□ -0.6
RBM3P98179 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC11.29□□□□□ -0.6
RBM3P98179 AL136116.3-201ENST00000402907 1138 ntBASIC11.29□□□□□ -0.6
RBM3P98179 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC11.29□□□□□ -0.6
RBM3P98179 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
RBM3P98179 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC11.29□□□□□ -0.6
RBM3P98179 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
RBM3P98179 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC11.29□□□□□ -0.6
RBM3P98179 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
RBM3P98179 KRT18P55-202ENST00000578578 1546 ntBASIC11.29□□□□□ -0.6
RBM3P98179 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RBM3P98179 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC11.29□□□□□ -0.6
RBM3P98179 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC11.29□□□□□ -0.6
RBM3P98179 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RBM3P98179 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RBM3P98179 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 LINC02228-203ENST00000641970 1355 ntBASIC11.28□□□□□ -0.6
RBM3P98179 GMCL1P1-201ENST00000463439 1581 ntBASIC11.28□□□□□ -0.6
RBM3P98179 MYLKP1-201ENST00000509077 1580 ntBASIC11.28□□□□□ -0.6
RBM3P98179 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
RBM3P98179 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
RBM3P98179 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC11.28□□□□□ -0.6
RBM3P98179 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC11.28□□□□□ -0.6
RBM3P98179 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
RBM3P98179 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC11.28□□□□□ -0.6
RBM3P98179 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 OS9-205ENST00000413095 1660 ntTSL 2 BASIC11.28□□□□□ -0.6
RBM3P98179 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC11.28□□□□□ -0.6
RBM3P98179 COX20-201ENST00000366528 568 ntTSL 2 BASIC11.28□□□□□ -0.6
RBM3P98179 RARRES2P4-201ENST00000514074 484 ntBASIC11.28□□□□□ -0.6
RBM3P98179 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC11.28□□□□□ -0.6
RBM3P98179 AL589743.5-201ENST00000616611 1050 ntBASIC11.28□□□□□ -0.6
RBM3P98179 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC11.28□□□□□ -0.6
RBM3P98179 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
RBM3P98179 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RBM3P98179 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms