Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD3P84022 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.22■□□□□ 0.67
SMAD3P84022 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.22■□□□□ 0.67
SMAD3P84022 PMS2P4-201ENST00000412466 1052 ntBASIC19.22■□□□□ 0.67
SMAD3P84022 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.22■□□□□ 0.67
SMAD3P84022 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD3P84022 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD3P84022 IGHV3-65-201ENST00000523210 341 ntBASIC19.22■□□□□ 0.67
SMAD3P84022 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.22■□□□□ 0.67
SMAD3P84022 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.22■□□□□ 0.67
SMAD3P84022 AC005225.4-201ENST00000557330 545 ntBASIC19.22■□□□□ 0.67
SMAD3P84022 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.22■□□□□ 0.67
SMAD3P84022 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD3P84022 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.22■□□□□ 0.67
SMAD3P84022 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SMAD3P84022 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SMAD3P84022 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD3P84022 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD3P84022 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD3P84022 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.22■□□□□ 0.67
SMAD3P84022 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD3P84022 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SMAD3P84022 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD3P84022 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SMAD3P84022 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD3P84022 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD3P84022 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD3P84022 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD3P84022 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD3P84022 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD3P84022 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
SMAD3P84022 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD3P84022 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD3P84022 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SMAD3P84022 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.21■□□□□ 0.67
SMAD3P84022 FAM58CP-201ENST00000435741 640 ntBASIC19.21■□□□□ 0.67
SMAD3P84022 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD3P84022 AC112698.1-201ENST00000510299 916 ntBASIC19.21■□□□□ 0.67
SMAD3P84022 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.21■□□□□ 0.67
SMAD3P84022 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.21■□□□□ 0.67
SMAD3P84022 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD3P84022 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SMAD3P84022 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.21■□□□□ 0.67
SMAD3P84022 AC008667.4-201ENST00000607370 168 ntBASIC19.21■□□□□ 0.67
SMAD3P84022 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SMAD3P84022 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.21■□□□□ 0.67
SMAD3P84022 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD3P84022 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.21■□□□□ 0.67
SMAD3P84022 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SMAD3P84022 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD3P84022 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD3P84022 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.21■□□□□ 0.67
SMAD3P84022 AC004817.3-201ENST00000602957 2129 ntBASIC19.21■□□□□ 0.67
SMAD3P84022 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.21■□□□□ 0.67
SMAD3P84022 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SMAD3P84022 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD3P84022 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SMAD3P84022 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD3P84022 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.2■□□□□ 0.66
SMAD3P84022 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD3P84022 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD3P84022 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD3P84022 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD3P84022 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD3P84022 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SMAD3P84022 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.2■□□□□ 0.66
SMAD3P84022 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD3P84022 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SMAD3P84022 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.2■□□□□ 0.66
SMAD3P84022 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD3P84022 ELK2BP-201ENST00000415014 1224 ntBASIC19.2■□□□□ 0.66
SMAD3P84022 FAM86GP-201ENST00000448322 971 ntBASIC19.2■□□□□ 0.66
SMAD3P84022 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.2■□□□□ 0.66
SMAD3P84022 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.2■□□□□ 0.66
SMAD3P84022 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.2■□□□□ 0.66
SMAD3P84022 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.2■□□□□ 0.66
SMAD3P84022 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.2■□□□□ 0.66
SMAD3P84022 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.2■□□□□ 0.66
SMAD3P84022 AC087641.1-201ENST00000557561 1021 ntBASIC19.2■□□□□ 0.66
SMAD3P84022 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.2■□□□□ 0.66
SMAD3P84022 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.2■□□□□ 0.66
SMAD3P84022 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.2■□□□□ 0.66
SMAD3P84022 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.2■□□□□ 0.66
SMAD3P84022 AC004877.2-201ENST00000623941 599 ntBASIC19.2■□□□□ 0.66
SMAD3P84022 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.2■□□□□ 0.66
SMAD3P84022 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.2■□□□□ 0.66
SMAD3P84022 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.2■□□□□ 0.66
SMAD3P84022 AC120498.9-201ENST00000339021 3867 ntBASIC19.2■□□□□ 0.66
SMAD3P84022 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.2■□□□□ 0.66
SMAD3P84022 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD3P84022 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD3P84022 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD3P84022 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD3P84022 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD3P84022 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD3P84022 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD3P84022 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD3P84022 SPDYE21P-201ENST00000413323 827 ntBASIC19.19■□□□□ 0.66
SMAD3P84022 AC007967.3-201ENST00000434308 558 ntBASIC19.19■□□□□ 0.66
SMAD3P84022 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms