Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.67□□□□□ -0.38
RPL39P62891 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RPL39P62891 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
RPL39P62891 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.67□□□□□ -0.38
RPL39P62891 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC12.67□□□□□ -0.38
RPL39P62891 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 PCDH8P1-201ENST00000428983 2773 ntBASIC12.67□□□□□ -0.38
RPL39P62891 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RPL39P62891 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC12.67□□□□□ -0.38
RPL39P62891 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.67□□□□□ -0.38
RPL39P62891 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 AC106886.4-201ENST00000623557 2502 ntBASIC12.66□□□□□ -0.38
RPL39P62891 PCDHB19P-201ENST00000570871 2371 ntBASIC12.66□□□□□ -0.38
RPL39P62891 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RPL39P62891 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC12.66□□□□□ -0.38
RPL39P62891 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 KRT16P1-201ENST00000399124 1418 ntBASIC12.66□□□□□ -0.38
RPL39P62891 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 BUB3-202ENST00000368859 667 ntTSL 3 BASIC12.66□□□□□ -0.38
RPL39P62891 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RPL39P62891 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
RPL39P62891 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC12.66□□□□□ -0.38
RPL39P62891 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.66□□□□□ -0.38
RPL39P62891 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RPL39P62891 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC12.66□□□□□ -0.38
RPL39P62891 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.66□□□□□ -0.38
RPL39P62891 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 GXYLT1P5-201ENST00000614548 1189 ntBASIC12.66□□□□□ -0.38
RPL39P62891 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC12.66□□□□□ -0.38
RPL39P62891 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
RPL39P62891 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.66□□□□□ -0.38
RPL39P62891 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RPL39P62891 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
RPL39P62891 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.66□□□□□ -0.38
RPL39P62891 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPL39P62891 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
RPL39P62891 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
RPL39P62891 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.65□□□□□ -0.38
RPL39P62891 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RPL39P62891 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.65□□□□□ -0.38
RPL39P62891 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC12.65□□□□□ -0.38
RPL39P62891 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.65□□□□□ -0.38
RPL39P62891 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
RPL39P62891 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RPL39P62891 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
RPL39P62891 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 GAS7-202ENST00000396115 929 ntTSL 5 BASIC12.65□□□□□ -0.38
RPL39P62891 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.65□□□□□ -0.38
RPL39P62891 AL109923.1-201ENST00000618799 583 ntBASIC12.65□□□□□ -0.38
RPL39P62891 CR392000.1-201ENST00000624770 1228 ntBASIC12.65□□□□□ -0.38
RPL39P62891 AL031985.4-201ENST00000642138 673 ntBASIC12.65□□□□□ -0.38
RPL39P62891 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms