Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC42P60953 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC42P60953 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.37■□□□□ 0.21
CDC42P60953 RNA5SP413-201ENST00000516373 109 ntBASIC16.37■□□□□ 0.21
CDC42P60953 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.37■□□□□ 0.21
CDC42P60953 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CDC42P60953 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CDC42P60953 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC42P60953 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC42P60953 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
CDC42P60953 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CDC42P60953 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC42P60953 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDC42P60953 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CDC42P60953 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC42P60953 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.37■□□□□ 0.21
CDC42P60953 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC42P60953 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDC42P60953 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.37■□□□□ 0.21
CDC42P60953 AC096733.2-201ENST00000609937 1394 ntBASIC16.37■□□□□ 0.21
CDC42P60953 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.37■□□□□ 0.21
CDC42P60953 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CDC42P60953 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CDC42P60953 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CDC42P60953 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 KRT18P23-201ENST00000435622 1283 ntBASIC16.36■□□□□ 0.21
CDC42P60953 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.36■□□□□ 0.21
CDC42P60953 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.36■□□□□ 0.21
CDC42P60953 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.36■□□□□ 0.21
CDC42P60953 AC073195.1-201ENST00000607241 877 ntBASIC16.36■□□□□ 0.21
CDC42P60953 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 HLA-J-201ENST00000462773 1622 ntBASIC16.36■□□□□ 0.21
CDC42P60953 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CDC42P60953 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CDC42P60953 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.36■□□□□ 0.21
CDC42P60953 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.36■□□□□ 0.21
CDC42P60953 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC42P60953 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC42P60953 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.35■□□□□ 0.21
CDC42P60953 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC42P60953 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.35■□□□□ 0.21
CDC42P60953 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
CDC42P60953 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDC42P60953 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC42P60953 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC42P60953 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.35■□□□□ 0.21
CDC42P60953 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC42P60953 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.35■□□□□ 0.21
CDC42P60953 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.35■□□□□ 0.21
CDC42P60953 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDC42P60953 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC42P60953 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC42P60953 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDC42P60953 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC42P60953 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDC42P60953 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.35■□□□□ 0.21
CDC42P60953 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.35■□□□□ 0.21
CDC42P60953 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.35■□□□□ 0.21
CDC42P60953 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CDC42P60953 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC42P60953 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.35■□□□□ 0.21
CDC42P60953 AC022898.2-201ENST00000616822 1312 ntBASIC16.35■□□□□ 0.21
CDC42P60953 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.35■□□□□ 0.21
CDC42P60953 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.35■□□□□ 0.21
CDC42P60953 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC42P60953 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDC42P60953 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.35■□□□□ 0.21
CDC42P60953 LINC00304-203ENST00000565008 1864 ntBASIC16.35■□□□□ 0.21
CDC42P60953 AL024508.2-201ENST00000607749 1894 ntBASIC16.35■□□□□ 0.21
CDC42P60953 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDC42P60953 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDC42P60953 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms