Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PER3P56645 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.57■□□□□ 0.24
PER3P56645 RNF126P1-202ENST00000569893 925 ntBASIC16.57■□□□□ 0.24
PER3P56645 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.57■□□□□ 0.24
PER3P56645 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.57■□□□□ 0.24
PER3P56645 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PER3P56645 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.57■□□□□ 0.24
PER3P56645 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PER3P56645 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PER3P56645 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PER3P56645 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PER3P56645 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PER3P56645 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.56■□□□□ 0.24
PER3P56645 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
PER3P56645 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.56■□□□□ 0.24
PER3P56645 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PER3P56645 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 KRT8P32-201ENST00000512863 1461 ntBASIC16.56■□□□□ 0.24
PER3P56645 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
PER3P56645 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 LINC00167-201ENST00000530583 1419 ntBASIC16.56■□□□□ 0.24
PER3P56645 AC233702.3-201ENST00000578656 1387 ntBASIC16.56■□□□□ 0.24
PER3P56645 HLA-A-201ENST00000376802 1334 ntBASIC16.56■□□□□ 0.24
PER3P56645 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.56■□□□□ 0.24
PER3P56645 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 MRPL3P1-201ENST00000400109 1033 ntBASIC16.56■□□□□ 0.24
PER3P56645 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.56■□□□□ 0.24
PER3P56645 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
PER3P56645 GUSBP12-201ENST00000513727 720 ntBASIC16.56■□□□□ 0.24
PER3P56645 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
PER3P56645 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.56■□□□□ 0.24
PER3P56645 AP001005.1-201ENST00000571755 1248 ntBASIC16.56■□□□□ 0.24
PER3P56645 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.56■□□□□ 0.24
PER3P56645 AC141586.5-201ENST00000624546 2050 ntBASIC16.56■□□□□ 0.24
PER3P56645 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PER3P56645 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PER3P56645 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PER3P56645 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.56■□□□□ 0.24
PER3P56645 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.56■□□□□ 0.24
PER3P56645 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PER3P56645 AC034236.2-201ENST00000606662 1610 ntBASIC16.56■□□□□ 0.24
PER3P56645 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PER3P56645 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
PER3P56645 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
PER3P56645 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PER3P56645 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.55■□□□□ 0.24
PER3P56645 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.55■□□□□ 0.24
PER3P56645 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 MIR564-202ENST00000385049 94 ntBASIC16.55■□□□□ 0.24
PER3P56645 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
PER3P56645 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
PER3P56645 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.55■□□□□ 0.24
PER3P56645 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.55■□□□□ 0.24
PER3P56645 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.55■□□□□ 0.24
PER3P56645 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.55■□□□□ 0.24
PER3P56645 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
PER3P56645 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PER3P56645 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.55■□□□□ 0.24
PER3P56645 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.55■□□□□ 0.24
PER3P56645 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.55■□□□□ 0.24
PER3P56645 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.55■□□□□ 0.24
PER3P56645 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PER3P56645 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
PER3P56645 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.55■□□□□ 0.24
PER3P56645 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms