Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CMC4P56277 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CMC4P56277 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CMC4P56277 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.32□□□□□ -0.28
CMC4P56277 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CMC4P56277 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.31□□□□□ -0.28
CMC4P56277 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.31□□□□□ -0.28
CMC4P56277 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CMC4P56277 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.31□□□□□ -0.28
CMC4P56277 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
CMC4P56277 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.31□□□□□ -0.28
CMC4P56277 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.31□□□□□ -0.28
CMC4P56277 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.31□□□□□ -0.28
CMC4P56277 AC096633.1-201ENST00000422446 749 ntBASIC13.31□□□□□ -0.28
CMC4P56277 HCG4P8-203ENST00000443049 980 ntBASIC13.31□□□□□ -0.28
CMC4P56277 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.31□□□□□ -0.28
CMC4P56277 TOB2P1-201ENST00000469761 992 ntBASIC13.31□□□□□ -0.28
CMC4P56277 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.31□□□□□ -0.28
CMC4P56277 AP000867.3-201ENST00000524675 377 ntBASIC13.31□□□□□ -0.28
CMC4P56277 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
CMC4P56277 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.31□□□□□ -0.28
CMC4P56277 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CMC4P56277 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.31□□□□□ -0.28
CMC4P56277 AL121772.3-201ENST00000610840 674 ntBASIC13.31□□□□□ -0.28
CMC4P56277 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
CMC4P56277 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.31□□□□□ -0.28
CMC4P56277 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CMC4P56277 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.31□□□□□ -0.28
CMC4P56277 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.31□□□□□ -0.28
CMC4P56277 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.31□□□□□ -0.28
CMC4P56277 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CMC4P56277 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.31□□□□□ -0.28
CMC4P56277 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.31□□□□□ -0.28
CMC4P56277 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.3□□□□□ -0.28
CMC4P56277 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.3□□□□□ -0.28
CMC4P56277 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.3□□□□□ -0.28
CMC4P56277 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CMC4P56277 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CMC4P56277 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.3□□□□□ -0.28
CMC4P56277 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.3□□□□□ -0.28
CMC4P56277 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 BX276092.7-203ENST00000637198 1536 ntBASIC13.3□□□□□ -0.28
CMC4P56277 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
CMC4P56277 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
CMC4P56277 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CMC4P56277 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.3□□□□□ -0.28
CMC4P56277 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CMC4P56277 AC103564.2-201ENST00000432853 1299 ntBASIC13.3□□□□□ -0.28
CMC4P56277 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CMC4P56277 AP002383.4-201ENST00000442518 975 ntBASIC13.3□□□□□ -0.28
CMC4P56277 KRT16P4-201ENST00000453883 522 ntBASIC13.3□□□□□ -0.28
CMC4P56277 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.3□□□□□ -0.28
CMC4P56277 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.3□□□□□ -0.28
CMC4P56277 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.3□□□□□ -0.28
CMC4P56277 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CMC4P56277 AC074051.2-201ENST00000565115 352 ntBASIC13.3□□□□□ -0.28
CMC4P56277 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms