Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
EPHB3P54753 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
EPHB3P54753 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.62■□□□□ 0.57
EPHB3P54753 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.62■□□□□ 0.57
EPHB3P54753 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.62■□□□□ 0.57
EPHB3P54753 BX005266.1-201ENST00000473402 457 ntBASIC18.62■□□□□ 0.57
EPHB3P54753 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.62■□□□□ 0.57
EPHB3P54753 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.62■□□□□ 0.57
EPHB3P54753 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.62■□□□□ 0.57
EPHB3P54753 TERC-201ENST00000602385 541 ntBASIC18.62■□□□□ 0.57
EPHB3P54753 AC116407.2-201ENST00000613639 860 ntBASIC18.62■□□□□ 0.57
EPHB3P54753 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.62■□□□□ 0.57
EPHB3P54753 AL022326.1-202ENST00000641533 845 ntBASIC18.62■□□□□ 0.57
EPHB3P54753 AC107918.4-202ENST00000641623 219 ntBASIC18.62■□□□□ 0.57
EPHB3P54753 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.62■□□□□ 0.57
EPHB3P54753 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
EPHB3P54753 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.62■□□□□ 0.57
EPHB3P54753 AC093677.2-201ENST00000600169 1863 ntBASIC18.62■□□□□ 0.57
EPHB3P54753 AC018445.3-201ENST00000624177 1945 ntBASIC18.62■□□□□ 0.57
EPHB3P54753 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
EPHB3P54753 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
EPHB3P54753 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHB3P54753 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHB3P54753 AC020763.4-201ENST00000623414 4170 ntBASIC18.62■□□□□ 0.57
EPHB3P54753 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
EPHB3P54753 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB3P54753 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB3P54753 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB3P54753 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB3P54753 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB3P54753 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.61■□□□□ 0.57
EPHB3P54753 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EPHB3P54753 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB3P54753 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB3P54753 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.61■□□□□ 0.57
EPHB3P54753 MIR940-201ENST00000401276 94 ntBASIC18.61■□□□□ 0.57
EPHB3P54753 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.61■□□□□ 0.57
EPHB3P54753 IGHV3-22-201ENST00000520721 359 ntBASIC18.61■□□□□ 0.57
EPHB3P54753 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.61■□□□□ 0.57
EPHB3P54753 AC105339.3-201ENST00000560043 636 ntBASIC18.61■□□□□ 0.57
EPHB3P54753 AC012640.2-201ENST00000561606 901 ntBASIC18.61■□□□□ 0.57
EPHB3P54753 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.61■□□□□ 0.57
EPHB3P54753 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.61■□□□□ 0.57
EPHB3P54753 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB3P54753 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EPHB3P54753 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPHB3P54753 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.61■□□□□ 0.57
EPHB3P54753 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
EPHB3P54753 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
EPHB3P54753 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.6■□□□□ 0.57
EPHB3P54753 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB3P54753 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.6■□□□□ 0.57
EPHB3P54753 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.6■□□□□ 0.57
EPHB3P54753 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB3P54753 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.6■□□□□ 0.57
EPHB3P54753 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB3P54753 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.6■□□□□ 0.57
EPHB3P54753 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.6■□□□□ 0.57
EPHB3P54753 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB3P54753 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.6■□□□□ 0.57
EPHB3P54753 LAGE3P1-201ENST00000425356 484 ntBASIC18.6■□□□□ 0.57
EPHB3P54753 AC098831.1-202ENST00000438821 336 ntBASIC18.6■□□□□ 0.57
EPHB3P54753 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.6■□□□□ 0.57
EPHB3P54753 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.6■□□□□ 0.57
EPHB3P54753 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB3P54753 POLD2P1-201ENST00000511220 997 ntBASIC18.6■□□□□ 0.57
EPHB3P54753 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.6■□□□□ 0.57
EPHB3P54753 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB3P54753 AC006538.3-201ENST00000612495 578 ntBASIC18.6■□□□□ 0.57
EPHB3P54753 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
EPHB3P54753 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.6■□□□□ 0.57
EPHB3P54753 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB3P54753 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB3P54753 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB3P54753 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
EPHB3P54753 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB3P54753 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.6■□□□□ 0.57
EPHB3P54753 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB3P54753 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.6■□□□□ 0.57
EPHB3P54753 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB3P54753 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB3P54753 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB3P54753 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
EPHB3P54753 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB3P54753 AC104109.2-201ENST00000602919 1418 ntBASIC18.59■□□□□ 0.57
EPHB3P54753 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB3P54753 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB3P54753 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB3P54753 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB3P54753 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB3P54753 PMS2P7-201ENST00000506558 1336 ntBASIC18.59■□□□□ 0.57
EPHB3P54753 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB3P54753 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB3P54753 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB3P54753 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.59■□□□□ 0.57
EPHB3P54753 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB3P54753 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.59■□□□□ 0.57
EPHB3P54753 AC145285.3-201ENST00000564603 959 ntBASIC18.59■□□□□ 0.57
EPHB3P54753 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.59■□□□□ 0.57
EPHB3P54753 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms