Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA2D1P54289 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.94■□□□□ 0.62
CACNA2D1P54289 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA2D1P54289 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.94■□□□□ 0.62
CACNA2D1P54289 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA2D1P54289 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA2D1P54289 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.93■□□□□ 0.62
CACNA2D1P54289 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.93■□□□□ 0.62
CACNA2D1P54289 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA2D1P54289 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA2D1P54289 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA2D1P54289 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA2D1P54289 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA2D1P54289 AC125634.1-201ENST00000438758 1403 ntBASIC18.93■□□□□ 0.62
CACNA2D1P54289 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA2D1P54289 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CACNA2D1P54289 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA2D1P54289 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA2D1P54289 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA2D1P54289 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA2D1P54289 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA2D1P54289 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.93■□□□□ 0.62
CACNA2D1P54289 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA2D1P54289 AC096582.2-201ENST00000510860 516 ntBASIC18.93■□□□□ 0.62
CACNA2D1P54289 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.93■□□□□ 0.62
CACNA2D1P54289 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.93■□□□□ 0.62
CACNA2D1P54289 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA2D1P54289 AC091304.2-201ENST00000564639 760 ntBASIC18.93■□□□□ 0.62
CACNA2D1P54289 AL121772.3-201ENST00000610840 674 ntBASIC18.93■□□□□ 0.62
CACNA2D1P54289 AC100803.2-201ENST00000562459 1963 ntBASIC18.93■□□□□ 0.62
CACNA2D1P54289 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CACNA2D1P54289 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA2D1P54289 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.93■□□□□ 0.62
CACNA2D1P54289 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA2D1P54289 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CACNA2D1P54289 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.93■□□□□ 0.62
CACNA2D1P54289 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA2D1P54289 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA2D1P54289 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA2D1P54289 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.92■□□□□ 0.62
CACNA2D1P54289 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CACNA2D1P54289 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CACNA2D1P54289 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.92■□□□□ 0.62
CACNA2D1P54289 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA2D1P54289 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA2D1P54289 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA2D1P54289 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA2D1P54289 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CACNA2D1P54289 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA2D1P54289 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.92■□□□□ 0.62
CACNA2D1P54289 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA2D1P54289 EMBP1-201ENST00000458200 901 ntBASIC18.92■□□□□ 0.62
CACNA2D1P54289 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.92■□□□□ 0.62
CACNA2D1P54289 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.92■□□□□ 0.62
CACNA2D1P54289 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA2D1P54289 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA2D1P54289 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.92■□□□□ 0.62
CACNA2D1P54289 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CACNA2D1P54289 AL691432.3-201ENST00000621860 400 ntBASIC18.92■□□□□ 0.62
CACNA2D1P54289 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.92■□□□□ 0.62
CACNA2D1P54289 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.92■□□□□ 0.62
CACNA2D1P54289 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA2D1P54289 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA2D1P54289 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA2D1P54289 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CACNA2D1P54289 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA2D1P54289 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.92■□□□□ 0.62
CACNA2D1P54289 BICD1-207ENST00000551848 1962 ntBASIC18.92■□□□□ 0.62
CACNA2D1P54289 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA2D1P54289 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA2D1P54289 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.91■□□□□ 0.62
CACNA2D1P54289 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.91■□□□□ 0.62
CACNA2D1P54289 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA2D1P54289 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA2D1P54289 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA2D1P54289 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA2D1P54289 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA2D1P54289 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.91■□□□□ 0.62
CACNA2D1P54289 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA2D1P54289 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CACNA2D1P54289 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA2D1P54289 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA2D1P54289 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.91■□□□□ 0.62
CACNA2D1P54289 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CACNA2D1P54289 RCN1P2-201ENST00000398357 915 ntBASIC18.91■□□□□ 0.62
CACNA2D1P54289 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CACNA2D1P54289 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.91■□□□□ 0.62
CACNA2D1P54289 DUTP2-201ENST00000519164 463 ntBASIC18.91■□□□□ 0.62
CACNA2D1P54289 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA2D1P54289 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.91■□□□□ 0.62
CACNA2D1P54289 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CACNA2D1P54289 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA2D1P54289 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CACNA2D1P54289 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA2D1P54289 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.91■□□□□ 0.62
CACNA2D1P54289 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.91■□□□□ 0.62
CACNA2D1P54289 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA2D1P54289 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA2D1P54289 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CACNA2D1P54289 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms