Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ITGA8P53708 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.37■□□□□ 0.53
ITGA8P53708 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.37■□□□□ 0.53
ITGA8P53708 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.37■□□□□ 0.53
ITGA8P53708 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.37■□□□□ 0.53
ITGA8P53708 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.37■□□□□ 0.53
ITGA8P53708 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ITGA8P53708 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
ITGA8P53708 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ITGA8P53708 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.37■□□□□ 0.53
ITGA8P53708 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ITGA8P53708 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.37■□□□□ 0.53
ITGA8P53708 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ITGA8P53708 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.36■□□□□ 0.53
ITGA8P53708 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA8P53708 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA8P53708 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA8P53708 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.36■□□□□ 0.53
ITGA8P53708 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA8P53708 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA8P53708 MIR718-201ENST00000390190 70 ntBASIC18.36■□□□□ 0.53
ITGA8P53708 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA8P53708 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.36■□□□□ 0.53
ITGA8P53708 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.36■□□□□ 0.53
ITGA8P53708 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.36■□□□□ 0.53
ITGA8P53708 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.36■□□□□ 0.53
ITGA8P53708 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA8P53708 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.36■□□□□ 0.53
ITGA8P53708 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ITGA8P53708 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
ITGA8P53708 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA8P53708 AC024243.1-201ENST00000609234 778 ntBASIC18.36■□□□□ 0.53
ITGA8P53708 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA8P53708 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA8P53708 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ITGA8P53708 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ITGA8P53708 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ITGA8P53708 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.35■□□□□ 0.53
ITGA8P53708 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.35■□□□□ 0.53
ITGA8P53708 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ITGA8P53708 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA8P53708 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.35■□□□□ 0.53
ITGA8P53708 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.35■□□□□ 0.53
ITGA8P53708 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.35■□□□□ 0.53
ITGA8P53708 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA8P53708 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ITGA8P53708 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA8P53708 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.35■□□□□ 0.53
ITGA8P53708 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA8P53708 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA8P53708 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA8P53708 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA8P53708 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.35■□□□□ 0.53
ITGA8P53708 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA8P53708 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA8P53708 AL596275.1-201ENST00000423464 877 ntBASIC18.35■□□□□ 0.53
ITGA8P53708 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.35■□□□□ 0.53
ITGA8P53708 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.35■□□□□ 0.53
ITGA8P53708 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.35■□□□□ 0.53
ITGA8P53708 AC010653.2-201ENST00000623505 997 ntBASIC18.35■□□□□ 0.53
ITGA8P53708 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA8P53708 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA8P53708 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA8P53708 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ITGA8P53708 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ITGA8P53708 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ITGA8P53708 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ITGA8P53708 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ITGA8P53708 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.34■□□□□ 0.53
ITGA8P53708 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA8P53708 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA8P53708 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
ITGA8P53708 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA8P53708 AL121761.2-201ENST00000598007 1648 ntBASIC18.34■□□□□ 0.53
ITGA8P53708 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA8P53708 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ITGA8P53708 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA8P53708 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA8P53708 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.34■□□□□ 0.53
ITGA8P53708 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA8P53708 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA8P53708 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.34■□□□□ 0.53
ITGA8P53708 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA8P53708 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.34■□□□□ 0.53
ITGA8P53708 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA8P53708 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA8P53708 REXO1L11P-201ENST00000620964 1927 ntBASIC18.34■□□□□ 0.53
ITGA8P53708 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA8P53708 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA8P53708 MIR1238-201ENST00000408483 83 ntBASIC18.34■□□□□ 0.53
ITGA8P53708 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA8P53708 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA8P53708 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA8P53708 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.34■□□□□ 0.53
ITGA8P53708 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ITGA8P53708 AC009949.1-201ENST00000623048 1830 ntBASIC18.34■□□□□ 0.53
ITGA8P53708 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
ITGA8P53708 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ITGA8P53708 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.34■□□□□ 0.53
ITGA8P53708 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms