Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDX1P52945 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDX1P52945 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.36■□□□□ 0.37
PDX1P52945 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDX1P52945 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDX1P52945 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
PDX1P52945 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDX1P52945 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDX1P52945 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PDX1P52945 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDX1P52945 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDX1P52945 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDX1P52945 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDX1P52945 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDX1P52945 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDX1P52945 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDX1P52945 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDX1P52945 KRT18P13-201ENST00000400056 1290 ntBASIC17.35■□□□□ 0.37
PDX1P52945 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.35■□□□□ 0.37
PDX1P52945 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.35■□□□□ 0.37
PDX1P52945 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.35■□□□□ 0.37
PDX1P52945 POLD2P1-201ENST00000511220 997 ntBASIC17.35■□□□□ 0.37
PDX1P52945 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.35■□□□□ 0.37
PDX1P52945 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.35■□□□□ 0.37
PDX1P52945 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
PDX1P52945 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDX1P52945 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDX1P52945 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDX1P52945 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PDX1P52945 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDX1P52945 MYLKP1-201ENST00000509077 1580 ntBASIC17.35■□□□□ 0.37
PDX1P52945 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDX1P52945 INTS4P1-201ENST00000438455 1935 ntBASIC17.35■□□□□ 0.37
PDX1P52945 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDX1P52945 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDX1P52945 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.35■□□□□ 0.37
PDX1P52945 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.35■□□□□ 0.37
PDX1P52945 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PDX1P52945 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDX1P52945 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDX1P52945 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PDX1P52945 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.34■□□□□ 0.37
PDX1P52945 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDX1P52945 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDX1P52945 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDX1P52945 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDX1P52945 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.34■□□□□ 0.37
PDX1P52945 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.34■□□□□ 0.37
PDX1P52945 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.34■□□□□ 0.37
PDX1P52945 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDX1P52945 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDX1P52945 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PDX1P52945 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDX1P52945 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDX1P52945 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDX1P52945 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PDX1P52945 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PDX1P52945 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDX1P52945 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.34■□□□□ 0.37
PDX1P52945 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.34■□□□□ 0.37
PDX1P52945 AC073648.2-201ENST00000510116 352 ntBASIC17.34■□□□□ 0.37
PDX1P52945 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.34■□□□□ 0.37
PDX1P52945 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.34■□□□□ 0.37
PDX1P52945 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.34■□□□□ 0.37
PDX1P52945 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDX1P52945 AC139887.3-201ENST00000568585 713 ntBASIC17.34■□□□□ 0.37
PDX1P52945 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.34■□□□□ 0.37
PDX1P52945 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.34■□□□□ 0.37
PDX1P52945 MTDHP3-201ENST00000594186 672 ntBASIC17.34■□□□□ 0.37
PDX1P52945 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.34■□□□□ 0.37
PDX1P52945 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.34■□□□□ 0.37
PDX1P52945 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PDX1P52945 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
PDX1P52945 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDX1P52945 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDX1P52945 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDX1P52945 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDX1P52945 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDX1P52945 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDX1P52945 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDX1P52945 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDX1P52945 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDX1P52945 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.33■□□□□ 0.37
PDX1P52945 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDX1P52945 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDX1P52945 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDX1P52945 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PDX1P52945 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.33■□□□□ 0.36
PDX1P52945 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PDX1P52945 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDX1P52945 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.33■□□□□ 0.36
PDX1P52945 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PDX1P52945 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDX1P52945 AC093909.1-201ENST00000504731 1122 ntBASIC17.33■□□□□ 0.36
PDX1P52945 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDX1P52945 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.33■□□□□ 0.36
PDX1P52945 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDX1P52945 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.33■□□□□ 0.36
PDX1P52945 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.33■□□□□ 0.36
PDX1P52945 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms