Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGA2P52926 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGA2P52926 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.31■□□□□ 0.2
HMGA2P52926 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
HMGA2P52926 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGA2P52926 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGA2P52926 KRT89P-201ENST00000620027 1478 ntBASIC16.31■□□□□ 0.2
HMGA2P52926 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HMGA2P52926 TNRC18P3-201ENST00000441896 2691 ntBASIC16.31■□□□□ 0.2
HMGA2P52926 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.31■□□□□ 0.2
HMGA2P52926 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGA2P52926 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.31■□□□□ 0.2
HMGA2P52926 AC005104.2-201ENST00000427818 678 ntBASIC16.31■□□□□ 0.2
HMGA2P52926 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.31■□□□□ 0.2
HMGA2P52926 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.31■□□□□ 0.2
HMGA2P52926 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
HMGA2P52926 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGA2P52926 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.31■□□□□ 0.2
HMGA2P52926 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HMGA2P52926 AP000525.1-201ENST00000608286 694 ntBASIC16.31■□□□□ 0.2
HMGA2P52926 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HMGA2P52926 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
HMGA2P52926 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGA2P52926 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGA2P52926 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGA2P52926 AGGF1P2-201ENST00000426656 2106 ntBASIC16.31■□□□□ 0.2
HMGA2P52926 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGA2P52926 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGA2P52926 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGA2P52926 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGA2P52926 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.3■□□□□ 0.2
HMGA2P52926 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.3■□□□□ 0.2
HMGA2P52926 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HMGA2P52926 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.3■□□□□ 0.2
HMGA2P52926 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 KRT8P47-201ENST00000604727 1398 ntBASIC16.3■□□□□ 0.2
HMGA2P52926 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.3■□□□□ 0.2
HMGA2P52926 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
HMGA2P52926 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HMGA2P52926 AL512604.3-201ENST00000569583 964 ntBASIC16.3■□□□□ 0.2
HMGA2P52926 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.3■□□□□ 0.2
HMGA2P52926 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.3■□□□□ 0.2
HMGA2P52926 AC106886.4-201ENST00000623557 2502 ntBASIC16.3■□□□□ 0.2
HMGA2P52926 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
HMGA2P52926 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.3■□□□□ 0.2
HMGA2P52926 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HMGA2P52926 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HMGA2P52926 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HMGA2P52926 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMGA2P52926 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
HMGA2P52926 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGA2P52926 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.29■□□□□ 0.2
HMGA2P52926 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.29■□□□□ 0.2
HMGA2P52926 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.29■□□□□ 0.2
HMGA2P52926 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.29■□□□□ 0.2
HMGA2P52926 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HMGA2P52926 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.29■□□□□ 0.2
HMGA2P52926 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
HMGA2P52926 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGA2P52926 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGA2P52926 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HMGA2P52926 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGA2P52926 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
HMGA2P52926 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGA2P52926 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMGA2P52926 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.29■□□□□ 0.2
HMGA2P52926 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMGA2P52926 AL390955.1-201ENST00000428694 934 ntBASIC16.29■□□□□ 0.2
HMGA2P52926 AC009947.2-201ENST00000444014 672 ntBASIC16.29■□□□□ 0.2
HMGA2P52926 AL158047.1-201ENST00000445918 881 ntBASIC16.29■□□□□ 0.2
HMGA2P52926 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.29■□□□□ 0.2
HMGA2P52926 TSPY20P-201ENST00000450910 630 ntBASIC16.29■□□□□ 0.2
HMGA2P52926 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.29■□□□□ 0.2
HMGA2P52926 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.29■□□□□ 0.2
HMGA2P52926 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HMGA2P52926 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.29■□□□□ 0.2
HMGA2P52926 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.29■□□□□ 0.2
HMGA2P52926 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGA2P52926 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.29■□□□□ 0.2
HMGA2P52926 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HMGA2P52926 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.29■□□□□ 0.2
HMGA2P52926 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGA2P52926 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms