Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CLCNKAP51800 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCNKAP51800 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCNKAP51800 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCNKAP51800 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCNKAP51800 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCNKAP51800 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.53■□□□□ 0.4
CLCNKAP51800 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCNKAP51800 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCNKAP51800 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCNKAP51800 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCNKAP51800 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CLCNKAP51800 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.52■□□□□ 0.4
CLCNKAP51800 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCNKAP51800 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCNKAP51800 AC004870.1-201ENST00000315132 882 ntBASIC17.52■□□□□ 0.4
CLCNKAP51800 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCNKAP51800 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CLCNKAP51800 AC096633.1-201ENST00000422446 749 ntBASIC17.52■□□□□ 0.4
CLCNKAP51800 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.52■□□□□ 0.4
CLCNKAP51800 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.52■□□□□ 0.4
CLCNKAP51800 MIR5100-201ENST00000579544 119 ntBASIC17.52■□□□□ 0.4
CLCNKAP51800 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCNKAP51800 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCNKAP51800 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CLCNKAP51800 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.52■□□□□ 0.4
CLCNKAP51800 ABALON-201ENST00000629058 1903 ntBASIC17.52■□□□□ 0.4
CLCNKAP51800 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLCNKAP51800 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLCNKAP51800 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLCNKAP51800 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CLCNKAP51800 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
CLCNKAP51800 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CLCNKAP51800 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLCNKAP51800 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLCNKAP51800 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.51■□□□□ 0.39
CLCNKAP51800 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CLCNKAP51800 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.51■□□□□ 0.39
CLCNKAP51800 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 TP73-AS1-210ENST00000637775 1455 ntBASIC17.51■□□□□ 0.39
CLCNKAP51800 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.51■□□□□ 0.39
CLCNKAP51800 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CLCNKAP51800 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.51■□□□□ 0.39
CLCNKAP51800 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CLCNKAP51800 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
CLCNKAP51800 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.51■□□□□ 0.39
CLCNKAP51800 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.51■□□□□ 0.39
CLCNKAP51800 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.51■□□□□ 0.39
CLCNKAP51800 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.51■□□□□ 0.39
CLCNKAP51800 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.51■□□□□ 0.39
CLCNKAP51800 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.51■□□□□ 0.39
CLCNKAP51800 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 AP000997.3-201ENST00000623333 2250 ntBASIC17.51■□□□□ 0.39
CLCNKAP51800 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCNKAP51800 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLCNKAP51800 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLCNKAP51800 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.5■□□□□ 0.39
CLCNKAP51800 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.5■□□□□ 0.39
CLCNKAP51800 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.5■□□□□ 0.39
CLCNKAP51800 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CLCNKAP51800 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.5■□□□□ 0.39
CLCNKAP51800 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CLCNKAP51800 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.5■□□□□ 0.39
CLCNKAP51800 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CLCNKAP51800 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CLCNKAP51800 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 NEFHP1-201ENST00000412845 2629 ntBASIC17.5■□□□□ 0.39
CLCNKAP51800 NUS1P2-201ENST00000417358 873 ntBASIC17.5■□□□□ 0.39
CLCNKAP51800 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.5■□□□□ 0.39
CLCNKAP51800 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.5■□□□□ 0.39
CLCNKAP51800 AC096582.2-201ENST00000510860 516 ntBASIC17.5■□□□□ 0.39
CLCNKAP51800 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.5■□□□□ 0.39
CLCNKAP51800 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.5■□□□□ 0.39
CLCNKAP51800 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms