Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
KRT6CP48668 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT6CP48668 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
KRT6CP48668 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT6CP48668 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.37■□□□□ 0.37
KRT6CP48668 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
KRT6CP48668 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT6CP48668 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6CP48668 LINC00602-201ENST00000629776 2065 ntBASIC17.36■□□□□ 0.37
KRT6CP48668 OR6D1P-203ENST00000641209 4860 ntBASIC17.36■□□□□ 0.37
KRT6CP48668 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6CP48668 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT6CP48668 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6CP48668 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6CP48668 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6CP48668 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6CP48668 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.36■□□□□ 0.37
KRT6CP48668 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT6CP48668 SLC25A3P1-201ENST00000443844 931 ntBASIC17.36■□□□□ 0.37
KRT6CP48668 ATP5G1P1-201ENST00000448724 379 ntBASIC17.36■□□□□ 0.37
KRT6CP48668 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6CP48668 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6CP48668 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
KRT6CP48668 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.36■□□□□ 0.37
KRT6CP48668 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT6CP48668 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT6CP48668 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT6CP48668 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.36■□□□□ 0.37
KRT6CP48668 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6CP48668 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6CP48668 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT6CP48668 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
KRT6CP48668 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
KRT6CP48668 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6CP48668 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6CP48668 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6CP48668 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.36■□□□□ 0.37
KRT6CP48668 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6CP48668 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6CP48668 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
KRT6CP48668 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6CP48668 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6CP48668 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.35■□□□□ 0.37
KRT6CP48668 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.35■□□□□ 0.37
KRT6CP48668 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
KRT6CP48668 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
KRT6CP48668 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.35■□□□□ 0.37
KRT6CP48668 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
KRT6CP48668 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KRT6CP48668 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KRT6CP48668 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.35■□□□□ 0.37
KRT6CP48668 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.35■□□□□ 0.37
KRT6CP48668 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.35■□□□□ 0.37
KRT6CP48668 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.35■□□□□ 0.37
KRT6CP48668 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.35■□□□□ 0.37
KRT6CP48668 AC116407.2-201ENST00000613639 860 ntBASIC17.35■□□□□ 0.37
KRT6CP48668 AC066615.1-201ENST00000640911 628 ntBASIC17.35■□□□□ 0.37
KRT6CP48668 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KRT6CP48668 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
KRT6CP48668 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.35■□□□□ 0.37
KRT6CP48668 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 PRORSD1P-202ENST00000563365 2154 ntBASIC17.35■□□□□ 0.37
KRT6CP48668 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KRT6CP48668 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6CP48668 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6CP48668 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.34■□□□□ 0.37
KRT6CP48668 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6CP48668 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6CP48668 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6CP48668 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6CP48668 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6CP48668 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6CP48668 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
KRT6CP48668 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6CP48668 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.34■□□□□ 0.37
KRT6CP48668 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6CP48668 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.34■□□□□ 0.37
KRT6CP48668 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.34■□□□□ 0.37
KRT6CP48668 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.34■□□□□ 0.37
KRT6CP48668 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.34■□□□□ 0.37
KRT6CP48668 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
KRT6CP48668 AC024563.2-201ENST00000603282 481 ntBASIC17.34■□□□□ 0.37
KRT6CP48668 KRT89P-201ENST00000620027 1478 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms