Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC6A12P48065 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC6A12P48065 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC6A12P48065 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.24■□□□□ 0.35
SLC6A12P48065 FAM86EP-206ENST00000510506 987 ntBASIC17.24■□□□□ 0.35
SLC6A12P48065 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC6A12P48065 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLC6A12P48065 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.24■□□□□ 0.35
SLC6A12P48065 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SLC6A12P48065 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC6A12P48065 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC6A12P48065 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC6A12P48065 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A12P48065 AL138688.1-201ENST00000624851 1594 ntBASIC17.23■□□□□ 0.35
SLC6A12P48065 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A12P48065 AC005332.1-201ENST00000577698 1310 ntBASIC17.23■□□□□ 0.35
SLC6A12P48065 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A12P48065 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SLC6A12P48065 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC6A12P48065 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SLC6A12P48065 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A12P48065 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC6A12P48065 BX276092.7-203ENST00000637198 1536 ntBASIC17.23■□□□□ 0.35
SLC6A12P48065 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A12P48065 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A12P48065 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SLC6A12P48065 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC6A12P48065 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A12P48065 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A12P48065 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
SLC6A12P48065 GUSBP12-201ENST00000513727 720 ntBASIC17.23■□□□□ 0.35
SLC6A12P48065 AL592071.1-201ENST00000611956 408 ntBASIC17.23■□□□□ 0.35
SLC6A12P48065 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC6A12P48065 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A12P48065 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A12P48065 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A12P48065 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC6A12P48065 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A12P48065 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A12P48065 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A12P48065 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC6A12P48065 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A12P48065 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A12P48065 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
SLC6A12P48065 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A12P48065 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A12P48065 AC097374.2-201ENST00000618617 1306 ntBASIC17.22■□□□□ 0.35
SLC6A12P48065 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A12P48065 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC6A12P48065 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A12P48065 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A12P48065 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A12P48065 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A12P48065 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A12P48065 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC6A12P48065 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SLC6A12P48065 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A12P48065 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.22■□□□□ 0.35
SLC6A12P48065 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC6A12P48065 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A12P48065 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A12P48065 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A12P48065 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A12P48065 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC6A12P48065 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A12P48065 AL845331.1-201ENST00000424978 1190 ntBASIC17.22■□□□□ 0.35
SLC6A12P48065 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.22■□□□□ 0.35
SLC6A12P48065 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC6A12P48065 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A12P48065 KRT8P26-201ENST00000534154 1276 ntBASIC17.22■□□□□ 0.35
SLC6A12P48065 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC6A12P48065 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC6A12P48065 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC6A12P48065 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A12P48065 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC6A12P48065 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A12P48065 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SLC6A12P48065 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SLC6A12P48065 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A12P48065 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms