Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SLC1A3P43003 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SLC1A3P43003 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC1A3P43003 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC1A3P43003 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SLC1A3P43003 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SLC1A3P43003 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SLC1A3P43003 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 AC099398.1-201ENST00000567919 2776 ntBASIC16.46■□□□□ 0.23
SLC1A3P43003 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.46■□□□□ 0.23
SLC1A3P43003 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SLC1A3P43003 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
SLC1A3P43003 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.46■□□□□ 0.22
SLC1A3P43003 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.46■□□□□ 0.22
SLC1A3P43003 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SLC1A3P43003 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SLC1A3P43003 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SLC1A3P43003 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC1A3P43003 RCN1P1-201ENST00000400413 996 ntBASIC16.45■□□□□ 0.22
SLC1A3P43003 AC104076.2-201ENST00000448912 469 ntBASIC16.45■□□□□ 0.22
SLC1A3P43003 AC092647.4-201ENST00000457211 535 ntBASIC16.45■□□□□ 0.22
SLC1A3P43003 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC1A3P43003 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC1A3P43003 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC1A3P43003 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SLC1A3P43003 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC1A3P43003 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SLC1A3P43003 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC1A3P43003 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 PCDHA12-202ENST00000613593 2588 ntBASIC16.45■□□□□ 0.22
SLC1A3P43003 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
SLC1A3P43003 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
SLC1A3P43003 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 LINC00167-201ENST00000530583 1419 ntBASIC16.45■□□□□ 0.22
SLC1A3P43003 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC1A3P43003 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A3P43003 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A3P43003 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A3P43003 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC1A3P43003 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A3P43003 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A3P43003 LINC00602-201ENST00000629776 2065 ntBASIC16.44■□□□□ 0.22
SLC1A3P43003 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A3P43003 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
SLC1A3P43003 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC1A3P43003 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC1A3P43003 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SLC1A3P43003 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
SLC1A3P43003 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
SLC1A3P43003 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A3P43003 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A3P43003 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A3P43003 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A3P43003 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC1A3P43003 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC1A3P43003 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC1A3P43003 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.44■□□□□ 0.22
SLC1A3P43003 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC1A3P43003 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
SLC1A3P43003 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC1A3P43003 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC1A3P43003 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC1A3P43003 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.44■□□□□ 0.22
SLC1A3P43003 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC1A3P43003 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC1A3P43003 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC1A3P43003 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms