Protein–RNA interactions for Protein: P42766

RPL35, 60S ribosomal protein L35, humanhuman

Known RBP Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P42766 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPL35P42766 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPL35P42766 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPL35P42766 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPL35P42766 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPL35P42766 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RPL35P42766 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RPL35P42766 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RPL35P42766 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
RPL35P42766 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.46□□□□□ -0.1
RPL35P42766 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RPL35P42766 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
RPL35P42766 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.46□□□□□ -0.1
RPL35P42766 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.46□□□□□ -0.1
RPL35P42766 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RPL35P42766 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RPL35P42766 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RPL35P42766 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPL35P42766 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPL35P42766 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPL35P42766 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.45□□□□□ -0.1
RPL35P42766 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.45□□□□□ -0.1
RPL35P42766 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RPL35P42766 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPL35P42766 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPL35P42766 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPL35P42766 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RPL35P42766 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RPL35P42766 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RPL35P42766 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.45□□□□□ -0.1
RPL35P42766 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPL35P42766 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.45□□□□□ -0.1
RPL35P42766 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.45□□□□□ -0.1
RPL35P42766 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPL35P42766 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
RPL35P42766 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RPL35P42766 AC110285.6-201ENST00000617652 491 ntBASIC14.45□□□□□ -0.1
RPL35P42766 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPL35P42766 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPL35P42766 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPL35P42766 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RPL35P42766 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.45□□□□□ -0.1
RPL35P42766 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.45□□□□□ -0.1
RPL35P42766 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
RPL35P42766 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPL35P42766 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.45□□□□□ -0.1
RPL35P42766 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RPL35P42766 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.45□□□□□ -0.1
RPL35P42766 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPL35P42766 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPL35P42766 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.45□□□□□ -0.1
RPL35P42766 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RPL35P42766 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.44□□□□□ -0.1
RPL35P42766 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.44□□□□□ -0.1
RPL35P42766 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RPL35P42766 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
RPL35P42766 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RPL35P42766 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RPL35P42766 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.44□□□□□ -0.1
RPL35P42766 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RPL35P42766 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.44□□□□□ -0.1
RPL35P42766 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC14.44□□□□□ -0.1
RPL35P42766 CYP2T3P-201ENST00000601990 817 ntBASIC14.44□□□□□ -0.1
RPL35P42766 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.44□□□□□ -0.1
RPL35P42766 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RPL35P42766 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.44□□□□□ -0.1
RPL35P42766 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RPL35P42766 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL35P42766 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL35P42766 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPL35P42766 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL35P42766 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL35P42766 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL35P42766 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.43□□□□□ -0.1
RPL35P42766 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RPL35P42766 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RPL35P42766 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms