Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HADHAP40939 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HADHAP40939 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HADHAP40939 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HADHAP40939 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HADHAP40939 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HADHAP40939 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HADHAP40939 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
HADHAP40939 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HADHAP40939 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HADHAP40939 KRT18P35-201ENST00000510488 1269 ntBASIC18.11■□□□□ 0.49
HADHAP40939 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HADHAP40939 ZNF444P1-201ENST00000559497 298 ntBASIC18.11■□□□□ 0.49
HADHAP40939 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.11■□□□□ 0.49
HADHAP40939 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.11■□□□□ 0.49
HADHAP40939 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.11■□□□□ 0.49
HADHAP40939 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.11■□□□□ 0.49
HADHAP40939 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.11■□□□□ 0.49
HADHAP40939 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HADHAP40939 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HADHAP40939 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HADHAP40939 SIRPAP1-201ENST00000448467 1770 ntBASIC18.11■□□□□ 0.49
HADHAP40939 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.11■□□□□ 0.49
HADHAP40939 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HADHAP40939 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HADHAP40939 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HADHAP40939 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HADHAP40939 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HADHAP40939 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HADHAP40939 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HADHAP40939 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HADHAP40939 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
HADHAP40939 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HADHAP40939 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.1■□□□□ 0.49
HADHAP40939 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.1■□□□□ 0.49
HADHAP40939 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HADHAP40939 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HADHAP40939 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HADHAP40939 ARMC10P1-201ENST00000313754 855 ntBASIC18.1■□□□□ 0.49
HADHAP40939 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HADHAP40939 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HADHAP40939 MIR662-201ENST00000384847 95 ntBASIC18.1■□□□□ 0.49
HADHAP40939 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.1■□□□□ 0.49
HADHAP40939 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.1■□□□□ 0.49
HADHAP40939 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HADHAP40939 DUTP2-201ENST00000519164 463 ntBASIC18.1■□□□□ 0.49
HADHAP40939 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.1■□□□□ 0.49
HADHAP40939 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.1■□□□□ 0.49
HADHAP40939 HYMAI.1-201ENST00000620949 238 ntBASIC18.1■□□□□ 0.49
HADHAP40939 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.1■□□□□ 0.49
HADHAP40939 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.1■□□□□ 0.49
HADHAP40939 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HADHAP40939 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HADHAP40939 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.1■□□□□ 0.49
HADHAP40939 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HADHAP40939 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HADHAP40939 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HADHAP40939 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HADHAP40939 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.1■□□□□ 0.49
HADHAP40939 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
HADHAP40939 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.1■□□□□ 0.49
HADHAP40939 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HADHAP40939 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HADHAP40939 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HADHAP40939 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.1■□□□□ 0.49
HADHAP40939 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.1■□□□□ 0.49
HADHAP40939 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
HADHAP40939 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HADHAP40939 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HADHAP40939 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.09■□□□□ 0.49
HADHAP40939 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HADHAP40939 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HADHAP40939 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HADHAP40939 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HADHAP40939 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HADHAP40939 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.09■□□□□ 0.49
HADHAP40939 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HADHAP40939 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HADHAP40939 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HADHAP40939 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
HADHAP40939 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HADHAP40939 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.09■□□□□ 0.49
HADHAP40939 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HADHAP40939 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.09■□□□□ 0.49
HADHAP40939 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HADHAP40939 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.09■□□□□ 0.49
HADHAP40939 AL671277.2-201ENST00000458060 996 ntBASIC18.09■□□□□ 0.49
HADHAP40939 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.09■□□□□ 0.49
HADHAP40939 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
HADHAP40939 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.09■□□□□ 0.49
HADHAP40939 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.09■□□□□ 0.49
HADHAP40939 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.09■□□□□ 0.49
HADHAP40939 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.09■□□□□ 0.49
HADHAP40939 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
HADHAP40939 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HADHAP40939 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HADHAP40939 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HADHAP40939 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HADHAP40939 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HADHAP40939 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms