Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.37■□□□□ 0.85
CLCN1P35523 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CLCN1P35523 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.37■□□□□ 0.85
CLCN1P35523 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CLCN1P35523 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 AL353807.1-201ENST00000427475 662 ntBASIC20.37■□□□□ 0.85
CLCN1P35523 GCSHP5-201ENST00000443090 522 ntBASIC20.37■□□□□ 0.85
CLCN1P35523 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.37■□□□□ 0.85
CLCN1P35523 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 CR392000.1-201ENST00000624770 1228 ntBASIC20.37■□□□□ 0.85
CLCN1P35523 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
CLCN1P35523 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.36■□□□□ 0.85
CLCN1P35523 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN1P35523 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN1P35523 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC20.36■□□□□ 0.85
CLCN1P35523 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CLCN1P35523 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN1P35523 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.36■□□□□ 0.85
CLCN1P35523 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN1P35523 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.36■□□□□ 0.85
CLCN1P35523 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CLCN1P35523 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN1P35523 AC091390.4-202ENST00000476426 537 ntBASIC20.36■□□□□ 0.85
CLCN1P35523 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CLCN1P35523 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.36■□□□□ 0.85
CLCN1P35523 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC20.36■□□□□ 0.85
CLCN1P35523 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN1P35523 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.36■□□□□ 0.85
CLCN1P35523 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CLCN1P35523 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN1P35523 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN1P35523 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN1P35523 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN1P35523 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN1P35523 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN1P35523 KRT16P1-201ENST00000399124 1418 ntBASIC20.36■□□□□ 0.85
CLCN1P35523 KRT8P11-201ENST00000409686 1436 ntBASIC20.36■□□□□ 0.85
CLCN1P35523 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN1P35523 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN1P35523 AC022188.1-201ENST00000620960 1664 ntBASIC20.35■□□□□ 0.85
CLCN1P35523 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CLCN1P35523 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN1P35523 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN1P35523 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN1P35523 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.35■□□□□ 0.85
CLCN1P35523 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN1P35523 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CLCN1P35523 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC20.35■□□□□ 0.85
CLCN1P35523 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN1P35523 RCC2P6-201ENST00000526625 1557 ntBASIC20.35■□□□□ 0.85
CLCN1P35523 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN1P35523 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.35■□□□□ 0.85
CLCN1P35523 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.35■□□□□ 0.85
CLCN1P35523 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN1P35523 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN1P35523 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CLCN1P35523 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CLCN1P35523 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CLCN1P35523 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CLCN1P35523 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.35■□□□□ 0.85
CLCN1P35523 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.35■□□□□ 0.85
CLCN1P35523 AC073195.1-201ENST00000607241 877 ntBASIC20.35■□□□□ 0.85
CLCN1P35523 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.35■□□□□ 0.85
CLCN1P35523 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CLCN1P35523 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN1P35523 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN1P35523 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN1P35523 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CLCN1P35523 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.35■□□□□ 0.85
CLCN1P35523 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN1P35523 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN1P35523 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN1P35523 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CLCN1P35523 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.35■□□□□ 0.85
CLCN1P35523 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN1P35523 AC105917.1-201ENST00000506637 2539 ntBASIC20.34■□□□□ 0.85
CLCN1P35523 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
CLCN1P35523 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN1P35523 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
CLCN1P35523 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN1P35523 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN1P35523 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN1P35523 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN1P35523 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN1P35523 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN1P35523 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN1P35523 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CLCN1P35523 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms