Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP6P35125 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
USP6P35125 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
USP6P35125 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
USP6P35125 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP6P35125 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
USP6P35125 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
USP6P35125 WIZP1-201ENST00000531444 2299 ntBASIC23.98■■□□□ 1.43
USP6P35125 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.98■■□□□ 1.43
USP6P35125 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP6P35125 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC23.98■■□□□ 1.43
USP6P35125 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC23.98■■□□□ 1.43
USP6P35125 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
USP6P35125 AC010654.1-201ENST00000615722 808 ntBASIC23.98■■□□□ 1.43
USP6P35125 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
USP6P35125 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP6P35125 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
USP6P35125 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC23.97■■□□□ 1.43
USP6P35125 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC23.97■■□□□ 1.43
USP6P35125 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC23.97■■□□□ 1.43
USP6P35125 EFTUD1P1-204ENST00000560401 1798 ntBASIC23.97■■□□□ 1.43
USP6P35125 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC23.97■■□□□ 1.43
USP6P35125 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC23.97■■□□□ 1.43
USP6P35125 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
USP6P35125 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
USP6P35125 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
USP6P35125 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC23.97■■□□□ 1.43
USP6P35125 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC23.97■■□□□ 1.43
USP6P35125 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC23.97■■□□□ 1.43
USP6P35125 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC23.97■■□□□ 1.43
USP6P35125 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC23.97■■□□□ 1.43
USP6P35125 AC004790.2-201ENST00000623588 572 ntBASIC23.97■■□□□ 1.43
USP6P35125 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC23.97■■□□□ 1.43
USP6P35125 AC010507.1-201ENST00000633895 436 ntBASIC23.97■■□□□ 1.43
USP6P35125 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC23.97■■□□□ 1.43
USP6P35125 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
USP6P35125 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
USP6P35125 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
USP6P35125 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC23.97■■□□□ 1.43
USP6P35125 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
USP6P35125 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
USP6P35125 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC23.97■■□□□ 1.43
USP6P35125 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
USP6P35125 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
USP6P35125 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
USP6P35125 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
USP6P35125 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
USP6P35125 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
USP6P35125 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
USP6P35125 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC23.96■■□□□ 1.43
USP6P35125 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC23.96■■□□□ 1.43
USP6P35125 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC23.96■■□□□ 1.43
USP6P35125 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
USP6P35125 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC23.96■■□□□ 1.43
USP6P35125 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC23.96■■□□□ 1.43
USP6P35125 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC23.96■■□□□ 1.43
USP6P35125 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC23.96■■□□□ 1.43
USP6P35125 AL353135.1-201ENST00000606729 504 ntBASIC23.96■■□□□ 1.43
USP6P35125 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
USP6P35125 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
USP6P35125 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
USP6P35125 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
USP6P35125 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC23.96■■□□□ 1.43
USP6P35125 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC23.96■■□□□ 1.43
USP6P35125 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
USP6P35125 AC135776.1-201ENST00000319817 2481 ntBASIC23.96■■□□□ 1.43
USP6P35125 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.43
USP6P35125 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
USP6P35125 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
USP6P35125 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
USP6P35125 FLYWCH1P1-201ENST00000460917 1874 ntBASIC23.95■■□□□ 1.43
USP6P35125 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
USP6P35125 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
USP6P35125 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC23.95■■□□□ 1.42
USP6P35125 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC23.95■■□□□ 1.42
USP6P35125 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC23.95■■□□□ 1.42
USP6P35125 STK19B-204ENST00000512515 211 ntBASIC23.95■■□□□ 1.42
USP6P35125 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC23.95■■□□□ 1.42
USP6P35125 AC005829.1-201ENST00000570002 483 ntBASIC23.95■■□□□ 1.42
USP6P35125 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC23.95■■□□□ 1.42
USP6P35125 MIR4469-201ENST00000583919 79 ntBASIC23.95■■□□□ 1.42
USP6P35125 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC23.95■■□□□ 1.42
USP6P35125 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC23.95■■□□□ 1.42
USP6P35125 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC23.95■■□□□ 1.42
USP6P35125 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC23.95■■□□□ 1.42
USP6P35125 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
USP6P35125 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC23.95■■□□□ 1.42
USP6P35125 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
USP6P35125 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
USP6P35125 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
USP6P35125 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
USP6P35125 AC002558.1-201ENST00000488906 803 ntBASIC23.94■■□□□ 1.42
USP6P35125 POLD4-207ENST00000531239 584 ntTSL 2 BASIC23.94■■□□□ 1.42
USP6P35125 MAL2-202ENST00000531508 892 ntTSL 3 BASIC23.94■■□□□ 1.42
USP6P35125 OR7E47P-204ENST00000575924 449 ntBASIC23.94■■□□□ 1.42
USP6P35125 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC23.94■■□□□ 1.42
USP6P35125 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC23.94■■□□□ 1.42
USP6P35125 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
USP6P35125 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC23.94■■□□□ 1.42
USP6P35125 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms