Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC126763.1-201ENST00000552015 2118 ntBASIC17.53■□□□□ 0.4
CDH3P22223 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH3P22223 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH3P22223 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH3P22223 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH3P22223 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CDH3P22223 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH3P22223 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH3P22223 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH3P22223 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH3P22223 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH3P22223 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH3P22223 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH3P22223 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH3P22223 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.52■□□□□ 0.4
CDH3P22223 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.52■□□□□ 0.4
CDH3P22223 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CDH3P22223 AC004263.2-201ENST00000617183 678 ntBASIC17.52■□□□□ 0.4
CDH3P22223 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH3P22223 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH3P22223 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
CDH3P22223 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH3P22223 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
CDH3P22223 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH3P22223 AL024508.2-201ENST00000607749 1894 ntBASIC17.52■□□□□ 0.39
CDH3P22223 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH3P22223 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH3P22223 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH3P22223 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
CDH3P22223 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH3P22223 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDH3P22223 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.52■□□□□ 0.39
CDH3P22223 BICD1-207ENST00000551848 1962 ntBASIC17.51■□□□□ 0.39
CDH3P22223 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH3P22223 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH3P22223 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH3P22223 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH3P22223 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH3P22223 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH3P22223 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH3P22223 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH3P22223 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH3P22223 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH3P22223 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH3P22223 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH3P22223 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDH3P22223 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CDH3P22223 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH3P22223 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH3P22223 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH3P22223 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH3P22223 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
CDH3P22223 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDH3P22223 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH3P22223 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDH3P22223 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDH3P22223 LINC00265-3P-201ENST00000447588 903 ntBASIC17.51■□□□□ 0.39
CDH3P22223 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH3P22223 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CDH3P22223 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH3P22223 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDH3P22223 MIR3652-201ENST00000579335 131 ntBASIC17.51■□□□□ 0.39
CDH3P22223 MIR3180-1-201ENST00000580374 94 ntBASIC17.51■□□□□ 0.39
CDH3P22223 MIR3180-3-201ENST00000584616 94 ntBASIC17.51■□□□□ 0.39
CDH3P22223 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.51■□□□□ 0.39
CDH3P22223 AC067852.2-201ENST00000590513 2313 ntBASIC17.51■□□□□ 0.39
CDH3P22223 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.51■□□□□ 0.39
CDH3P22223 CLEC4GP1-201ENST00000596555 870 ntBASIC17.51■□□□□ 0.39
CDH3P22223 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CDH3P22223 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH3P22223 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH3P22223 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDH3P22223 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CDH3P22223 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CDH3P22223 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH3P22223 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH3P22223 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH3P22223 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH3P22223 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH3P22223 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDH3P22223 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH3P22223 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH3P22223 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CDH3P22223 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CDH3P22223 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH3P22223 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH3P22223 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH3P22223 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH3P22223 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDH3P22223 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH3P22223 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH3P22223 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH3P22223 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CDH3P22223 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH3P22223 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH3P22223 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH3P22223 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.5■□□□□ 0.39
CDH3P22223 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.5■□□□□ 0.39
CDH3P22223 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDH3P22223 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms