Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB3BP20337 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
RAB3BP20337 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3BP20337 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3BP20337 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3BP20337 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3BP20337 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3BP20337 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3BP20337 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3BP20337 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3BP20337 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 LINC00304-203ENST00000565008 1864 ntBASIC15.69■□□□□ 0.1
RAB3BP20337 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB3BP20337 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB3BP20337 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB3BP20337 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 UBALD1-205ENST00000590891 2641 ntBASIC15.69■□□□□ 0.1
RAB3BP20337 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAB3BP20337 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAB3BP20337 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
RAB3BP20337 HLA-J-201ENST00000462773 1622 ntBASIC15.69■□□□□ 0.1
RAB3BP20337 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB3BP20337 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAB3BP20337 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB3BP20337 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
RAB3BP20337 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.69■□□□□ 0.1
RAB3BP20337 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB3BP20337 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB3BP20337 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB3BP20337 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB3BP20337 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAB3BP20337 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAB3BP20337 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RAB3BP20337 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB3BP20337 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 AC100803.2-201ENST00000562459 1963 ntBASIC15.69■□□□□ 0.1
RAB3BP20337 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.69■□□□□ 0.1
RAB3BP20337 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB3BP20337 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
RAB3BP20337 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.69■□□□□ 0.1
RAB3BP20337 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB3BP20337 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB3BP20337 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RAB3BP20337 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB3BP20337 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB3BP20337 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3BP20337 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3BP20337 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3BP20337 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RAB3BP20337 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
RAB3BP20337 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB3BP20337 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3BP20337 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3BP20337 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB3BP20337 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3BP20337 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RAB3BP20337 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RAB3BP20337 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB3BP20337 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3BP20337 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3BP20337 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.68■□□□□ 0.1
RAB3BP20337 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
RAB3BP20337 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.68■□□□□ 0.1
RAB3BP20337 AC233263.1-201ENST00000578059 224 ntBASIC15.68■□□□□ 0.1
RAB3BP20337 AC110285.5-201ENST00000611501 352 ntBASIC15.68■□□□□ 0.1
RAB3BP20337 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RAB3BP20337 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3BP20337 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3BP20337 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3BP20337 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RAB3BP20337 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RAB3BP20337 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3BP20337 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3BP20337 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3BP20337 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB3BP20337 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RAB3BP20337 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3BP20337 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3BP20337 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
RAB3BP20337 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3BP20337 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RAB3BP20337 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RAB3BP20337 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms