Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PDGFRAP16234 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFRAP16234 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFRAP16234 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFRAP16234 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.79■□□□□ 0.6
PDGFRAP16234 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFRAP16234 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFRAP16234 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFRAP16234 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.79■□□□□ 0.6
PDGFRAP16234 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFRAP16234 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFRAP16234 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFRAP16234 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.78■□□□□ 0.6
PDGFRAP16234 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFRAP16234 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFRAP16234 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
PDGFRAP16234 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFRAP16234 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFRAP16234 GNAS-203ENST00000306120 1878 ntBASIC18.78■□□□□ 0.6
PDGFRAP16234 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PDGFRAP16234 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PDGFRAP16234 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFRAP16234 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFRAP16234 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
PDGFRAP16234 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFRAP16234 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFRAP16234 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.78■□□□□ 0.6
PDGFRAP16234 TSPY22P-201ENST00000427496 604 ntBASIC18.78■□□□□ 0.6
PDGFRAP16234 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.78■□□□□ 0.6
PDGFRAP16234 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
PDGFRAP16234 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFRAP16234 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.78■□□□□ 0.6
PDGFRAP16234 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.78■□□□□ 0.6
PDGFRAP16234 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFRAP16234 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.78■□□□□ 0.6
PDGFRAP16234 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.78■□□□□ 0.6
PDGFRAP16234 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFRAP16234 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFRAP16234 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFRAP16234 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFRAP16234 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFRAP16234 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.77■□□□□ 0.6
PDGFRAP16234 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFRAP16234 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.77■□□□□ 0.6
PDGFRAP16234 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.77■□□□□ 0.6
PDGFRAP16234 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.77■□□□□ 0.6
PDGFRAP16234 AC006116.8-202ENST00000587620 1550 ntBASIC18.77■□□□□ 0.6
PDGFRAP16234 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.77■□□□□ 0.6
PDGFRAP16234 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PDGFRAP16234 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFRAP16234 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFRAP16234 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFRAP16234 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PDGFRAP16234 AC068472.1-201ENST00000474589 881 ntBASIC18.77■□□□□ 0.6
PDGFRAP16234 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFRAP16234 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.77■□□□□ 0.6
PDGFRAP16234 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFRAP16234 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PDGFRAP16234 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PDGFRAP16234 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDGFRAP16234 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDGFRAP16234 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDGFRAP16234 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
PDGFRAP16234 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFRAP16234 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
PDGFRAP16234 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFRAP16234 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFRAP16234 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFRAP16234 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFRAP16234 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFRAP16234 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PDGFRAP16234 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PDGFRAP16234 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFRAP16234 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
PDGFRAP16234 AC112698.1-201ENST00000510299 916 ntBASIC18.76■□□□□ 0.59
PDGFRAP16234 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFRAP16234 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.76■□□□□ 0.59
PDGFRAP16234 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFRAP16234 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.76■□□□□ 0.59
PDGFRAP16234 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.76■□□□□ 0.59
PDGFRAP16234 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.76■□□□□ 0.59
PDGFRAP16234 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.76■□□□□ 0.59
PDGFRAP16234 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PDGFRAP16234 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFRAP16234 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PDGFRAP16234 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.76■□□□□ 0.59
PDGFRAP16234 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.76■□□□□ 0.59
PDGFRAP16234 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFRAP16234 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PDGFRAP16234 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFRAP16234 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.76■□□□□ 0.59
PDGFRAP16234 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFRAP16234 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.75■□□□□ 0.59
PDGFRAP16234 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFRAP16234 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFRAP16234 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.75■□□□□ 0.59
PDGFRAP16234 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFRAP16234 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFRAP16234 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFRAP16234 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms