Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2AFXP16104 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
H2AFXP16104 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.56■□□□□ 0.56
H2AFXP16104 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2AFXP16104 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2AFXP16104 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2AFXP16104 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
H2AFXP16104 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.56■□□□□ 0.56
H2AFXP16104 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2AFXP16104 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2AFXP16104 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H2AFXP16104 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H2AFXP16104 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
H2AFXP16104 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.56■□□□□ 0.56
H2AFXP16104 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H2AFXP16104 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
H2AFXP16104 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.56■□□□□ 0.56
H2AFXP16104 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.56■□□□□ 0.56
H2AFXP16104 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.56■□□□□ 0.56
H2AFXP16104 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.56■□□□□ 0.56
H2AFXP16104 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.56■□□□□ 0.56
H2AFXP16104 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2AFXP16104 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H2AFXP16104 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.56■□□□□ 0.56
H2AFXP16104 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
H2AFXP16104 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2AFXP16104 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2AFXP16104 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
H2AFXP16104 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.56■□□□□ 0.56
H2AFXP16104 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2AFXP16104 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
H2AFXP16104 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
H2AFXP16104 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2AFXP16104 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.55■□□□□ 0.56
H2AFXP16104 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.55■□□□□ 0.56
H2AFXP16104 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2AFXP16104 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.55■□□□□ 0.56
H2AFXP16104 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
H2AFXP16104 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.55■□□□□ 0.56
H2AFXP16104 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2AFXP16104 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.55■□□□□ 0.56
H2AFXP16104 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2AFXP16104 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
H2AFXP16104 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
H2AFXP16104 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.55■□□□□ 0.56
H2AFXP16104 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
H2AFXP16104 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2AFXP16104 OR6D1P-202ENST00000641007 5290 ntBASIC18.55■□□□□ 0.56
H2AFXP16104 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2AFXP16104 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2AFXP16104 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.55■□□□□ 0.56
H2AFXP16104 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2AFXP16104 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2AFXP16104 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.55■□□□□ 0.56
H2AFXP16104 AC079328.2-201ENST00000561241 3354 ntBASIC18.55■□□□□ 0.56
H2AFXP16104 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
H2AFXP16104 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.54■□□□□ 0.56
H2AFXP16104 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.54■□□□□ 0.56
H2AFXP16104 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.54■□□□□ 0.56
H2AFXP16104 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.54■□□□□ 0.56
H2AFXP16104 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
H2AFXP16104 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.54■□□□□ 0.56
H2AFXP16104 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.54■□□□□ 0.56
H2AFXP16104 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
H2AFXP16104 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.54■□□□□ 0.56
H2AFXP16104 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.54■□□□□ 0.56
H2AFXP16104 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.54■□□□□ 0.56
H2AFXP16104 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.54■□□□□ 0.56
H2AFXP16104 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.54■□□□□ 0.56
H2AFXP16104 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
H2AFXP16104 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2AFXP16104 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
H2AFXP16104 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
H2AFXP16104 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
H2AFXP16104 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2AFXP16104 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2AFXP16104 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2AFXP16104 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2AFXP16104 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
H2AFXP16104 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2AFXP16104 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms