Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA4P13612 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.62■□□□□ 0.73
ITGA4P13612 MTCL1P1-201ENST00000446207 792 ntBASIC19.62■□□□□ 0.73
ITGA4P13612 AC096582.2-201ENST00000510860 516 ntBASIC19.62■□□□□ 0.73
ITGA4P13612 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.62■□□□□ 0.73
ITGA4P13612 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.62■□□□□ 0.73
ITGA4P13612 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.62■□□□□ 0.73
ITGA4P13612 AC104692.2-201ENST00000603054 253 ntBASIC19.62■□□□□ 0.73
ITGA4P13612 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ITGA4P13612 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA4P13612 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA4P13612 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.62■□□□□ 0.73
ITGA4P13612 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
ITGA4P13612 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA4P13612 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.62■□□□□ 0.73
ITGA4P13612 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA4P13612 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA4P13612 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA4P13612 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.61■□□□□ 0.73
ITGA4P13612 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA4P13612 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA4P13612 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA4P13612 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA4P13612 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA4P13612 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA4P13612 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA4P13612 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.61■□□□□ 0.73
ITGA4P13612 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ITGA4P13612 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA4P13612 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA4P13612 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
ITGA4P13612 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA4P13612 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.61■□□□□ 0.73
ITGA4P13612 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.61■□□□□ 0.73
ITGA4P13612 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.61■□□□□ 0.73
ITGA4P13612 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.61■□□□□ 0.73
ITGA4P13612 AL160237.2-201ENST00000556165 472 ntBASIC19.61■□□□□ 0.73
ITGA4P13612 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.61■□□□□ 0.73
ITGA4P13612 AL591684.3-201ENST00000605187 298 ntBASIC19.61■□□□□ 0.73
ITGA4P13612 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA4P13612 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA4P13612 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ITGA4P13612 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA4P13612 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA4P13612 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.61■□□□□ 0.73
ITGA4P13612 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA4P13612 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.61■□□□□ 0.73
ITGA4P13612 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA4P13612 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.61■□□□□ 0.73
ITGA4P13612 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.61■□□□□ 0.73
ITGA4P13612 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA4P13612 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA4P13612 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ITGA4P13612 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA4P13612 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.6■□□□□ 0.73
ITGA4P13612 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA4P13612 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA4P13612 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.6■□□□□ 0.73
ITGA4P13612 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.6■□□□□ 0.73
ITGA4P13612 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA4P13612 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.6■□□□□ 0.73
ITGA4P13612 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA4P13612 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ITGA4P13612 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.6■□□□□ 0.73
ITGA4P13612 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA4P13612 AC008764.6-201ENST00000595909 2069 ntBASIC19.6■□□□□ 0.73
ITGA4P13612 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA4P13612 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA4P13612 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA4P13612 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.6■□□□□ 0.73
ITGA4P13612 KRT18P65-201ENST00000439811 1286 ntBASIC19.6■□□□□ 0.73
ITGA4P13612 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.6■□□□□ 0.73
ITGA4P13612 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.6■□□□□ 0.73
ITGA4P13612 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.6■□□□□ 0.73
ITGA4P13612 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ITGA4P13612 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA4P13612 MIR5100-201ENST00000579544 119 ntBASIC19.6■□□□□ 0.73
ITGA4P13612 AC005336.2-201ENST00000593183 939 ntBASIC19.6■□□□□ 0.73
ITGA4P13612 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.6■□□□□ 0.73
ITGA4P13612 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA4P13612 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.6■□□□□ 0.73
ITGA4P13612 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.6■□□□□ 0.73
ITGA4P13612 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA4P13612 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA4P13612 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA4P13612 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA4P13612 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA4P13612 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA4P13612 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA4P13612 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ITGA4P13612 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.59■□□□□ 0.73
ITGA4P13612 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA4P13612 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA4P13612 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ITGA4P13612 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA4P13612 AKR1C7P-201ENST00000305623 895 ntBASIC19.59■□□□□ 0.73
ITGA4P13612 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA4P13612 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.59■□□□□ 0.73
ITGA4P13612 AC009078.2-202ENST00000463353 338 ntBASIC19.59■□□□□ 0.73
ITGA4P13612 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms