Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 MIR3687-1-201ENST00000614492 61 ntBASIC16.81■□□□□ 0.28
CCL4P13236 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.81■□□□□ 0.28
CCL4P13236 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL4P13236 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL4P13236 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL4P13236 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL4P13236 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL4P13236 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL4P13236 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL4P13236 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL4P13236 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL4P13236 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.81■□□□□ 0.28
CCL4P13236 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL4P13236 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL4P13236 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL4P13236 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCL4P13236 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL4P13236 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL4P13236 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL4P13236 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL4P13236 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL4P13236 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL4P13236 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCL4P13236 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL4P13236 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL4P13236 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL4P13236 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL4P13236 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.8■□□□□ 0.28
CCL4P13236 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CCL4P13236 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL4P13236 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL4P13236 AC136632.2-201ENST00000512891 861 ntBASIC16.8■□□□□ 0.28
CCL4P13236 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
CCL4P13236 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.8■□□□□ 0.28
CCL4P13236 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL4P13236 AC064836.3-201ENST00000607928 673 ntBASIC16.8■□□□□ 0.28
CCL4P13236 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL4P13236 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL4P13236 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCL4P13236 AL096828.2-201ENST00000567259 1965 ntBASIC16.8■□□□□ 0.28
CCL4P13236 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL4P13236 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL4P13236 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL4P13236 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL4P13236 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL4P13236 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL4P13236 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL4P13236 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL4P13236 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCL4P13236 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL4P13236 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CCL4P13236 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CCL4P13236 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL4P13236 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL4P13236 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCL4P13236 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL4P13236 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL4P13236 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL4P13236 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.79■□□□□ 0.28
CCL4P13236 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL4P13236 AL020989.1-201ENST00000422979 469 ntBASIC16.79■□□□□ 0.28
CCL4P13236 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.79■□□□□ 0.28
CCL4P13236 DNAJB3-201ENST00000446806 729 ntBASIC16.79■□□□□ 0.28
CCL4P13236 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.79■□□□□ 0.28
CCL4P13236 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL4P13236 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.79■□□□□ 0.28
CCL4P13236 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL4P13236 PGM5P2-202ENST00000637225 1043 ntBASIC16.79■□□□□ 0.28
CCL4P13236 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCL4P13236 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL4P13236 AL049757.1-201ENST00000616842 1596 ntBASIC16.79■□□□□ 0.28
CCL4P13236 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCL4P13236 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL4P13236 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.79■□□□□ 0.28
CCL4P13236 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL4P13236 AC132938.5-201ENST00000624980 1813 ntBASIC16.79■□□□□ 0.28
CCL4P13236 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL4P13236 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL4P13236 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL4P13236 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCL4P13236 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL4P13236 AC148477.5-201ENST00000625164 1645 ntBASIC16.78■□□□□ 0.28
CCL4P13236 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCL4P13236 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.78■□□□□ 0.28
CCL4P13236 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCL4P13236 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCL4P13236 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL4P13236 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCL4P13236 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 AC004832.2-201ENST00000426397 482 ntBASIC16.78■□□□□ 0.28
CCL4P13236 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 KRT18P2-201ENST00000447938 1258 ntBASIC16.78■□□□□ 0.28
CCL4P13236 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms