Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 ADM-208ENST00000534464 1640 ntTSL 2 BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 COX5BP2-201ENST00000392354 334 ntBASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 PON3-203ENST00000427422 894 ntTSL 3 BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 C20orf181-201ENST00000623918 480 ntBASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CSB-PGBD3P0DP91 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 CNN2P11-201ENST00000429351 262 ntBASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 ARTN-206ENST00000472435 402 ntTSL 3 BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CSB-PGBD3P0DP91 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC23.58■■□□□ 1.36
CSB-PGBD3P0DP91 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 AC004790.2-201ENST00000623588 572 ntBASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSB-PGBD3P0DP91 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 AC148477.5-201ENST00000625164 1645 ntBASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 HCG4B-203ENST00000450128 991 ntBASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 RPS15P9-201ENST00000494093 319 ntBASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 GPR89P-201ENST00000407924 1495 ntBASIC23.56■■□□□ 1.36
CSB-PGBD3P0DP91 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 AC132938.5-201ENST00000624980 1813 ntBASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 CEND1P1-201ENST00000451006 455 ntBASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 IGHV3-65-201ENST00000523210 341 ntBASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms