Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR1AP08908 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR1AP08908 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR1AP08908 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.34■□□□□ 0.21
HTR1AP08908 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HTR1AP08908 MIR935-201ENST00000401179 91 ntBASIC16.34■□□□□ 0.21
HTR1AP08908 AC004980.1-204ENST00000429707 299 ntBASIC16.34■□□□□ 0.21
HTR1AP08908 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.34■□□□□ 0.21
HTR1AP08908 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.34■□□□□ 0.21
HTR1AP08908 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HTR1AP08908 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR1AP08908 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.34■□□□□ 0.21
HTR1AP08908 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.34■□□□□ 0.21
HTR1AP08908 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR1AP08908 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.34■□□□□ 0.21
HTR1AP08908 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HTR1AP08908 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.34■□□□□ 0.21
HTR1AP08908 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR1AP08908 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HTR1AP08908 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.34■□□□□ 0.21
HTR1AP08908 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR1AP08908 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR1AP08908 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR1AP08908 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR1AP08908 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
HTR1AP08908 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR1AP08908 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR1AP08908 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR1AP08908 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.34■□□□□ 0.21
HTR1AP08908 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HTR1AP08908 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HTR1AP08908 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
HTR1AP08908 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.33■□□□□ 0.21
HTR1AP08908 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HTR1AP08908 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
HTR1AP08908 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HTR1AP08908 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HTR1AP08908 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HTR1AP08908 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HTR1AP08908 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HTR1AP08908 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HTR1AP08908 MIR564-202ENST00000385049 94 ntBASIC16.33■□□□□ 0.2
HTR1AP08908 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
HTR1AP08908 AC026366.1-201ENST00000488803 879 ntBASIC16.33■□□□□ 0.2
HTR1AP08908 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.33■□□□□ 0.2
HTR1AP08908 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
HTR1AP08908 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.33■□□□□ 0.2
HTR1AP08908 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HTR1AP08908 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
HTR1AP08908 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HTR1AP08908 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HTR1AP08908 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HTR1AP08908 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
HTR1AP08908 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HTR1AP08908 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HTR1AP08908 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
HTR1AP08908 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.33■□□□□ 0.2
HTR1AP08908 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HTR1AP08908 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.33■□□□□ 0.2
HTR1AP08908 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.32■□□□□ 0.2
HTR1AP08908 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HTR1AP08908 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTR1AP08908 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HTR1AP08908 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTR1AP08908 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTR1AP08908 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTR1AP08908 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HTR1AP08908 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTR1AP08908 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.32■□□□□ 0.2
HTR1AP08908 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HTR1AP08908 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HTR1AP08908 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTR1AP08908 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.32■□□□□ 0.2
HTR1AP08908 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTR1AP08908 AC004951.3-201ENST00000418645 1148 ntBASIC16.32■□□□□ 0.2
HTR1AP08908 NIFKP9-201ENST00000419265 221 ntBASIC16.32■□□□□ 0.2
HTR1AP08908 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTR1AP08908 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTR1AP08908 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
HTR1AP08908 AC091390.4-202ENST00000476426 537 ntBASIC16.32■□□□□ 0.2
HTR1AP08908 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTR1AP08908 RNA5SP413-201ENST00000516373 109 ntBASIC16.32■□□□□ 0.2
HTR1AP08908 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.32■□□□□ 0.2
HTR1AP08908 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HTR1AP08908 AC233263.1-201ENST00000578059 224 ntBASIC16.32■□□□□ 0.2
HTR1AP08908 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.32■□□□□ 0.2
HTR1AP08908 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTR1AP08908 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.32■□□□□ 0.2
HTR1AP08908 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HTR1AP08908 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTR1AP08908 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTR1AP08908 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.31■□□□□ 0.2
HTR1AP08908 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HTR1AP08908 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTR1AP08908 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTR1AP08908 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HTR1AP08908 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTR1AP08908 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HTR1AP08908 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HTR1AP08908 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms