Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPB1P04440 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPB1P04440 AP005242.2-201ENST00000580065 1175 ntBASIC16.11■□□□□ 0.17
HLA-DPB1P04440 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPB1P04440 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPB1P04440 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HLA-DPB1P04440 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPB1P04440 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPB1P04440 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HLA-DPB1P04440 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.11■□□□□ 0.17
HLA-DPB1P04440 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HLA-DPB1P04440 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPB1P04440 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HLA-DPB1P04440 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPB1P04440 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPB1P04440 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPB1P04440 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DPB1P04440 KRT8P9-201ENST00000558927 1449 ntBASIC16.11■□□□□ 0.17
HLA-DPB1P04440 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.1■□□□□ 0.17
HLA-DPB1P04440 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DPB1P04440 AL118508.1-201ENST00000613502 2345 ntBASIC16.1■□□□□ 0.17
HLA-DPB1P04440 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 AL138688.1-201ENST00000624851 1594 ntBASIC16.09■□□□□ 0.17
HLA-DPB1P04440 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 MMP23A-201ENST00000234610 1017 ntBASIC16.09■□□□□ 0.17
HLA-DPB1P04440 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 CYP2D8P-201ENST00000433633 1490 ntBASIC16.09■□□□□ 0.17
HLA-DPB1P04440 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DPB1P04440 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DPB1P04440 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DPB1P04440 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DPB1P04440 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.08■□□□□ 0.17
HLA-DPB1P04440 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DPB1P04440 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DPB1P04440 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DPB1P04440 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DPB1P04440 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms