Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6AP02538 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6AP02538 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6AP02538 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
KRT6AP02538 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6AP02538 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT6AP02538 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.35■□□□□ 0.37
KRT6AP02538 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.35■□□□□ 0.37
KRT6AP02538 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
KRT6AP02538 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.35■□□□□ 0.37
KRT6AP02538 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
KRT6AP02538 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KRT6AP02538 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.35■□□□□ 0.37
KRT6AP02538 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.35■□□□□ 0.37
KRT6AP02538 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.35■□□□□ 0.37
KRT6AP02538 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.35■□□□□ 0.37
KRT6AP02538 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.35■□□□□ 0.37
KRT6AP02538 AC116407.2-201ENST00000613639 860 ntBASIC17.35■□□□□ 0.37
KRT6AP02538 AC066615.1-201ENST00000640911 628 ntBASIC17.35■□□□□ 0.37
KRT6AP02538 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KRT6AP02538 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.35■□□□□ 0.37
KRT6AP02538 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
KRT6AP02538 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KRT6AP02538 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT6AP02538 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6AP02538 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.34■□□□□ 0.37
KRT6AP02538 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.34■□□□□ 0.37
KRT6AP02538 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6AP02538 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6AP02538 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6AP02538 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6AP02538 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6AP02538 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
KRT6AP02538 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.34■□□□□ 0.37
KRT6AP02538 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6AP02538 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.34■□□□□ 0.37
KRT6AP02538 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.34■□□□□ 0.37
KRT6AP02538 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.34■□□□□ 0.37
KRT6AP02538 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
KRT6AP02538 AC024563.2-201ENST00000603282 481 ntBASIC17.34■□□□□ 0.37
KRT6AP02538 KRT89P-201ENST00000620027 1478 ntBASIC17.34■□□□□ 0.37
KRT6AP02538 AL023973.1-201ENST00000624619 620 ntBASIC17.34■□□□□ 0.37
KRT6AP02538 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6AP02538 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6AP02538 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
KRT6AP02538 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
KRT6AP02538 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
KRT6AP02538 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6AP02538 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KRT6AP02538 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
KRT6AP02538 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.33■□□□□ 0.37
KRT6AP02538 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.33■□□□□ 0.37
KRT6AP02538 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
KRT6AP02538 AC100803.2-201ENST00000562459 1963 ntBASIC17.33■□□□□ 0.37
KRT6AP02538 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
KRT6AP02538 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.33■□□□□ 0.37
KRT6AP02538 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
KRT6AP02538 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
KRT6AP02538 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.33■□□□□ 0.37
KRT6AP02538 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
KRT6AP02538 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.33■□□□□ 0.36
KRT6AP02538 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KRT6AP02538 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.33■□□□□ 0.36
KRT6AP02538 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KRT6AP02538 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.33■□□□□ 0.36
KRT6AP02538 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.33■□□□□ 0.36
KRT6AP02538 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
KRT6AP02538 RASA4DP-201ENST00000460726 1199 ntBASIC17.33■□□□□ 0.36
KRT6AP02538 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
KRT6AP02538 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
KRT6AP02538 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.33■□□□□ 0.36
KRT6AP02538 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.33■□□□□ 0.36
KRT6AP02538 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.33■□□□□ 0.36
KRT6AP02538 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.33■□□□□ 0.36
KRT6AP02538 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
KRT6AP02538 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KRT6AP02538 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
KRT6AP02538 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.33■□□□□ 0.36
KRT6AP02538 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KRT6AP02538 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
KRT6AP02538 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6AP02538 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms