Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TIMP1P01033 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.22■□□□□ 0.67
TIMP1P01033 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TIMP1P01033 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TIMP1P01033 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TIMP1P01033 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TIMP1P01033 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TIMP1P01033 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.22■□□□□ 0.67
TIMP1P01033 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TIMP1P01033 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.22■□□□□ 0.67
TIMP1P01033 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.22■□□□□ 0.67
TIMP1P01033 AC109322.1-201ENST00000524499 1264 ntBASIC19.22■□□□□ 0.67
TIMP1P01033 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.22■□□□□ 0.67
TIMP1P01033 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.22■□□□□ 0.67
TIMP1P01033 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.22■□□□□ 0.67
TIMP1P01033 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.22■□□□□ 0.67
TIMP1P01033 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TIMP1P01033 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TIMP1P01033 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.21■□□□□ 0.67
TIMP1P01033 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
TIMP1P01033 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TIMP1P01033 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TIMP1P01033 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TIMP1P01033 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TIMP1P01033 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TIMP1P01033 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.21■□□□□ 0.67
TIMP1P01033 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.21■□□□□ 0.67
TIMP1P01033 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.21■□□□□ 0.67
TIMP1P01033 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.21■□□□□ 0.67
TIMP1P01033 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.21■□□□□ 0.67
TIMP1P01033 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TIMP1P01033 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TIMP1P01033 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.21■□□□□ 0.67
TIMP1P01033 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TIMP1P01033 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.21■□□□□ 0.67
TIMP1P01033 REXO1L3P-201ENST00000622202 1288 ntBASIC19.21■□□□□ 0.67
TIMP1P01033 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
TIMP1P01033 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TIMP1P01033 AL121761.2-201ENST00000598007 1648 ntBASIC19.21■□□□□ 0.67
TIMP1P01033 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.21■□□□□ 0.67
TIMP1P01033 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIMP1P01033 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.2■□□□□ 0.66
TIMP1P01033 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIMP1P01033 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TIMP1P01033 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIMP1P01033 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIMP1P01033 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIMP1P01033 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.2■□□□□ 0.66
TIMP1P01033 DUTP2-201ENST00000519164 463 ntBASIC19.2■□□□□ 0.66
TIMP1P01033 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.2■□□□□ 0.66
TIMP1P01033 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.2■□□□□ 0.66
TIMP1P01033 AC022145.2-201ENST00000598203 171 ntBASIC19.2■□□□□ 0.66
TIMP1P01033 LINC00628-201ENST00000628516 1289 ntBASIC19.2■□□□□ 0.66
TIMP1P01033 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TIMP1P01033 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TIMP1P01033 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.2■□□□□ 0.66
TIMP1P01033 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TIMP1P01033 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIMP1P01033 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIMP1P01033 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIMP1P01033 AC018445.3-201ENST00000624177 1945 ntBASIC19.19■□□□□ 0.66
TIMP1P01033 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.19■□□□□ 0.66
TIMP1P01033 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIMP1P01033 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TIMP1P01033 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.19■□□□□ 0.66
TIMP1P01033 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIMP1P01033 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.19■□□□□ 0.66
TIMP1P01033 DDX43P3-201ENST00000441064 443 ntBASIC19.19■□□□□ 0.66
TIMP1P01033 AC023141.5-201ENST00000458585 616 ntBASIC19.19■□□□□ 0.66
TIMP1P01033 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.19■□□□□ 0.66
TIMP1P01033 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.19■□□□□ 0.66
TIMP1P01033 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.19■□□□□ 0.66
TIMP1P01033 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TIMP1P01033 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
TIMP1P01033 AC190387.1-201ENST00000551683 408 ntBASIC19.19■□□□□ 0.66
TIMP1P01033 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.19■□□□□ 0.66
TIMP1P01033 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.19■□□□□ 0.66
TIMP1P01033 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.19■□□□□ 0.66
TIMP1P01033 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.19■□□□□ 0.66
TIMP1P01033 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.19■□□□□ 0.66
TIMP1P01033 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.19■□□□□ 0.66
TIMP1P01033 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
TIMP1P01033 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIMP1P01033 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TIMP1P01033 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIMP1P01033 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TIMP1P01033 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIMP1P01033 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP1P01033 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.18■□□□□ 0.66
TIMP1P01033 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.18■□□□□ 0.66
TIMP1P01033 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP1P01033 AC093010.1-201ENST00000473625 1624 ntBASIC19.18■□□□□ 0.66
TIMP1P01033 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP1P01033 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.18■□□□□ 0.66
TIMP1P01033 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP1P01033 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP1P01033 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.18■□□□□ 0.66
TIMP1P01033 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.18■□□□□ 0.66
TIMP1P01033 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.18■□□□□ 0.66
TIMP1P01033 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms