Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TOP3BO95985 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TOP3BO95985 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TOP3BO95985 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.34■□□□□ 0.53
TOP3BO95985 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TOP3BO95985 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TOP3BO95985 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TOP3BO95985 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TOP3BO95985 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.34■□□□□ 0.53
TOP3BO95985 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.34■□□□□ 0.53
TOP3BO95985 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
TOP3BO95985 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TOP3BO95985 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.34■□□□□ 0.53
TOP3BO95985 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.34■□□□□ 0.53
TOP3BO95985 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.34■□□□□ 0.53
TOP3BO95985 AC117500.6-201ENST00000624871 588 ntBASIC18.34■□□□□ 0.53
TOP3BO95985 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TOP3BO95985 GPAT2P1-201ENST00000444924 1672 ntBASIC18.34■□□□□ 0.53
TOP3BO95985 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.34■□□□□ 0.53
TOP3BO95985 AL096828.2-201ENST00000567259 1965 ntBASIC18.33■□□□□ 0.53
TOP3BO95985 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TOP3BO95985 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TOP3BO95985 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TOP3BO95985 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TOP3BO95985 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TOP3BO95985 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TOP3BO95985 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TOP3BO95985 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TOP3BO95985 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TOP3BO95985 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
TOP3BO95985 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.33■□□□□ 0.52
TOP3BO95985 LINC00265-3P-201ENST00000447588 903 ntBASIC18.33■□□□□ 0.52
TOP3BO95985 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.33■□□□□ 0.52
TOP3BO95985 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.33■□□□□ 0.52
TOP3BO95985 KRT8P26-201ENST00000534154 1276 ntBASIC18.33■□□□□ 0.52
TOP3BO95985 AL662844.1-201ENST00000546340 181 ntBASIC18.33■□□□□ 0.52
TOP3BO95985 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.33■□□□□ 0.52
TOP3BO95985 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.33■□□□□ 0.52
TOP3BO95985 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TOP3BO95985 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TOP3BO95985 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.33■□□□□ 0.52
TOP3BO95985 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TOP3BO95985 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TOP3BO95985 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TOP3BO95985 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.33■□□□□ 0.52
TOP3BO95985 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
TOP3BO95985 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TOP3BO95985 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TOP3BO95985 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TOP3BO95985 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.33■□□□□ 0.52
TOP3BO95985 AC106820.2-201ENST00000563775 3264 ntBASIC18.33■□□□□ 0.52
TOP3BO95985 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP3BO95985 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP3BO95985 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP3BO95985 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.32■□□□□ 0.52
TOP3BO95985 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TOP3BO95985 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TOP3BO95985 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TOP3BO95985 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TOP3BO95985 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP3BO95985 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP3BO95985 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TOP3BO95985 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP3BO95985 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.32■□□□□ 0.52
TOP3BO95985 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.32■□□□□ 0.52
TOP3BO95985 CHCHD2P8-201ENST00000429873 447 ntBASIC18.32■□□□□ 0.52
TOP3BO95985 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.32■□□□□ 0.52
TOP3BO95985 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.32■□□□□ 0.52
TOP3BO95985 KRT16P4-201ENST00000453883 522 ntBASIC18.32■□□□□ 0.52
TOP3BO95985 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.32■□□□□ 0.52
TOP3BO95985 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.32■□□□□ 0.52
TOP3BO95985 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.32■□□□□ 0.52
TOP3BO95985 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.32■□□□□ 0.52
TOP3BO95985 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP3BO95985 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP3BO95985 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TOP3BO95985 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TOP3BO95985 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.31■□□□□ 0.52
TOP3BO95985 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TOP3BO95985 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.31■□□□□ 0.52
TOP3BO95985 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TOP3BO95985 GNAS-203ENST00000306120 1878 ntBASIC18.31■□□□□ 0.52
TOP3BO95985 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TOP3BO95985 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TOP3BO95985 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TOP3BO95985 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.31■□□□□ 0.52
TOP3BO95985 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
TOP3BO95985 AL023284.2-201ENST00000405850 579 ntBASIC18.31■□□□□ 0.52
TOP3BO95985 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
TOP3BO95985 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TOP3BO95985 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.31■□□□□ 0.52
TOP3BO95985 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.31■□□□□ 0.52
TOP3BO95985 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.31■□□□□ 0.52
TOP3BO95985 KRT18P41-201ENST00000518924 1277 ntBASIC18.31■□□□□ 0.52
TOP3BO95985 AC092865.5-201ENST00000545435 363 ntBASIC18.31■□□□□ 0.52
TOP3BO95985 TPSP2-201ENST00000561760 610 ntBASIC18.31■□□□□ 0.52
TOP3BO95985 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.31■□□□□ 0.52
TOP3BO95985 LINC01711-201ENST00000598340 967 ntBASIC18.31■□□□□ 0.52
TOP3BO95985 AL121912.1-201ENST00000603683 238 ntBASIC18.31■□□□□ 0.52
TOP3BO95985 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms