Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC093010.1-201ENST00000473625 1624 ntBASIC15.9■□□□□ 0.14
CNOT4O95628 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT4O95628 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNOT4O95628 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNOT4O95628 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.89■□□□□ 0.13
CNOT4O95628 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNOT4O95628 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CNOT4O95628 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.89■□□□□ 0.13
CNOT4O95628 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNOT4O95628 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNOT4O95628 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNOT4O95628 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNOT4O95628 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNOT4O95628 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CNOT4O95628 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNOT4O95628 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.89■□□□□ 0.13
CNOT4O95628 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNOT4O95628 LINC00265-3P-201ENST00000447588 903 ntBASIC15.89■□□□□ 0.13
CNOT4O95628 KRT17P6-201ENST00000453795 1220 ntBASIC15.89■□□□□ 0.13
CNOT4O95628 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.89■□□□□ 0.13
CNOT4O95628 DUTP2-201ENST00000519164 463 ntBASIC15.89■□□□□ 0.13
CNOT4O95628 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.89■□□□□ 0.13
CNOT4O95628 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.89■□□□□ 0.13
CNOT4O95628 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.89■□□□□ 0.13
CNOT4O95628 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.89■□□□□ 0.13
CNOT4O95628 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNOT4O95628 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNOT4O95628 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CNOT4O95628 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNOT4O95628 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNOT4O95628 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.89■□□□□ 0.13
CNOT4O95628 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.89■□□□□ 0.13
CNOT4O95628 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNOT4O95628 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNOT4O95628 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CNOT4O95628 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.89■□□□□ 0.13
CNOT4O95628 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CNOT4O95628 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNOT4O95628 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CNOT4O95628 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.88■□□□□ 0.13
CNOT4O95628 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
CNOT4O95628 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNOT4O95628 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CNOT4O95628 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNOT4O95628 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNOT4O95628 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CNOT4O95628 AC104819.1-201ENST00000504587 486 ntBASIC15.88■□□□□ 0.13
CNOT4O95628 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.88■□□□□ 0.13
CNOT4O95628 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNOT4O95628 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.88■□□□□ 0.13
CNOT4O95628 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CNOT4O95628 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.88■□□□□ 0.13
CNOT4O95628 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.88■□□□□ 0.13
CNOT4O95628 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.88■□□□□ 0.13
CNOT4O95628 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNOT4O95628 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNOT4O95628 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNOT4O95628 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNOT4O95628 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.88■□□□□ 0.13
CNOT4O95628 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNOT4O95628 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.88■□□□□ 0.13
CNOT4O95628 AC022898.2-201ENST00000616822 1312 ntBASIC15.88■□□□□ 0.13
CNOT4O95628 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNOT4O95628 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CNOT4O95628 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNOT4O95628 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNOT4O95628 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNOT4O95628 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNOT4O95628 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.87■□□□□ 0.13
CNOT4O95628 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNOT4O95628 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNOT4O95628 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNOT4O95628 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.87■□□□□ 0.13
CNOT4O95628 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNOT4O95628 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.87■□□□□ 0.13
CNOT4O95628 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNOT4O95628 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.87■□□□□ 0.13
CNOT4O95628 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CNOT4O95628 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.87■□□□□ 0.13
CNOT4O95628 MTCL1P1-201ENST00000446207 792 ntBASIC15.87■□□□□ 0.13
CNOT4O95628 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CNOT4O95628 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.87■□□□□ 0.13
CNOT4O95628 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.87■□□□□ 0.13
CNOT4O95628 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.87■□□□□ 0.13
CNOT4O95628 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.87■□□□□ 0.13
CNOT4O95628 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNOT4O95628 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.87■□□□□ 0.13
CNOT4O95628 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.87■□□□□ 0.13
CNOT4O95628 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
CNOT4O95628 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CNOT4O95628 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNOT4O95628 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNOT4O95628 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNOT4O95628 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNOT4O95628 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNOT4O95628 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CNOT4O95628 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNOT4O95628 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.87■□□□□ 0.13
CNOT4O95628 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNOT4O95628 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms