Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.85■□□□□ 0.45
CBX6O95503 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CBX6O95503 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CBX6O95503 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CBX6O95503 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CBX6O95503 PKD1P1-201ENST00000458669 6805 ntBASIC17.85■□□□□ 0.45
CBX6O95503 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CBX6O95503 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CBX6O95503 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CBX6O95503 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CBX6O95503 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CBX6O95503 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.85■□□□□ 0.45
CBX6O95503 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CBX6O95503 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.85■□□□□ 0.45
CBX6O95503 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CBX6O95503 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.85■□□□□ 0.45
CBX6O95503 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.85■□□□□ 0.45
CBX6O95503 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CBX6O95503 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.85■□□□□ 0.45
CBX6O95503 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CBX6O95503 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CBX6O95503 C2orf69P3-201ENST00000565542 1120 ntBASIC17.85■□□□□ 0.45
CBX6O95503 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.85■□□□□ 0.45
CBX6O95503 FSCN1P1-201ENST00000568912 1481 ntBASIC17.85■□□□□ 0.45
CBX6O95503 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.85■□□□□ 0.45
CBX6O95503 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CBX6O95503 HLA-A-209ENST00000638375 975 ntBASIC17.85■□□□□ 0.45
CBX6O95503 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CBX6O95503 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CBX6O95503 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.85■□□□□ 0.45
CBX6O95503 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
CBX6O95503 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.85■□□□□ 0.45
CBX6O95503 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.85■□□□□ 0.45
CBX6O95503 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CBX6O95503 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CBX6O95503 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CBX6O95503 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX6O95503 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX6O95503 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.84■□□□□ 0.45
CBX6O95503 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.84■□□□□ 0.45
CBX6O95503 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CBX6O95503 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CBX6O95503 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CBX6O95503 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.84■□□□□ 0.45
CBX6O95503 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX6O95503 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX6O95503 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.84■□□□□ 0.45
CBX6O95503 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.84■□□□□ 0.45
CBX6O95503 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CBX6O95503 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX6O95503 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.84■□□□□ 0.45
CBX6O95503 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CBX6O95503 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.84■□□□□ 0.45
CBX6O95503 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CBX6O95503 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.84■□□□□ 0.45
CBX6O95503 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CBX6O95503 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX6O95503 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX6O95503 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX6O95503 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX6O95503 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CBX6O95503 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CBX6O95503 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX6O95503 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX6O95503 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CBX6O95503 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.83■□□□□ 0.45
CBX6O95503 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CBX6O95503 PCDHB19P-201ENST00000570871 2371 ntBASIC17.83■□□□□ 0.45
CBX6O95503 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CBX6O95503 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CBX6O95503 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CBX6O95503 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CBX6O95503 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX6O95503 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CBX6O95503 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.83■□□□□ 0.44
CBX6O95503 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX6O95503 TSPY14P-201ENST00000303979 915 ntBASIC17.83■□□□□ 0.44
CBX6O95503 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX6O95503 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX6O95503 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.83■□□□□ 0.44
CBX6O95503 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CBX6O95503 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
CBX6O95503 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.83■□□□□ 0.44
CBX6O95503 EGLN1P1-201ENST00000531623 762 ntBASIC17.83■□□□□ 0.44
CBX6O95503 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CBX6O95503 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.83■□□□□ 0.44
CBX6O95503 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.83■□□□□ 0.44
CBX6O95503 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
CBX6O95503 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.83■□□□□ 0.44
CBX6O95503 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.83■□□□□ 0.44
CBX6O95503 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX6O95503 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX6O95503 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX6O95503 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX6O95503 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.83■□□□□ 0.44
CBX6O95503 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX6O95503 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.83■□□□□ 0.44
CBX6O95503 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CBX6O95503 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.83■□□□□ 0.44
CBX6O95503 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms