Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 MED15P5-201ENST00000423150 992 ntBASIC14.99□□□□□ -0.01
ABCA1O95477 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.99□□□□□ -0.01
ABCA1O95477 KRT18P3-201ENST00000451602 1288 ntBASIC14.99□□□□□ -0.01
ABCA1O95477 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
ABCA1O95477 AC034105.1-201ENST00000563488 319 ntBASIC14.99□□□□□ -0.01
ABCA1O95477 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
ABCA1O95477 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.99□□□□□ -0.01
ABCA1O95477 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.99□□□□□ -0.01
ABCA1O95477 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ABCA1O95477 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA1O95477 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA1O95477 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA1O95477 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA1O95477 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA1O95477 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.98□□□□□ -0.01
ABCA1O95477 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA1O95477 AC005082.1-201ENST00000413042 2259 ntBASIC14.98□□□□□ -0.01
ABCA1O95477 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.98□□□□□ -0.01
ABCA1O95477 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ABCA1O95477 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.98□□□□□ -0.01
ABCA1O95477 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA1O95477 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
ABCA1O95477 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.98□□□□□ -0.01
ABCA1O95477 AC098831.1-202ENST00000438821 336 ntBASIC14.98□□□□□ -0.01
ABCA1O95477 AL591424.1-201ENST00000442569 1213 ntBASIC14.98□□□□□ -0.01
ABCA1O95477 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.98□□□□□ -0.01
ABCA1O95477 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA1O95477 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA1O95477 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA1O95477 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA1O95477 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
ABCA1O95477 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.98□□□□□ -0.01
ABCA1O95477 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA1O95477 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.98□□□□□ -0.01
ABCA1O95477 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA1O95477 AL163051.1-201ENST00000569214 1512 ntBASIC14.98□□□□□ -0.01
ABCA1O95477 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.98□□□□□ -0.01
ABCA1O95477 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.97□□□□□ -0.01
ABCA1O95477 FGFR3P6-201ENST00000457012 610 ntBASIC14.97□□□□□ -0.01
ABCA1O95477 AC012640.2-201ENST00000561606 901 ntBASIC14.97□□□□□ -0.01
ABCA1O95477 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.97□□□□□ -0.01
ABCA1O95477 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
ABCA1O95477 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.97□□□□□ -0.01
ABCA1O95477 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 TP73-AS1-210ENST00000637775 1455 ntBASIC14.97□□□□□ -0.01
ABCA1O95477 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.97□□□□□ -0.01
ABCA1O95477 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.97□□□□□ -0.01
ABCA1O95477 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ABCA1O95477 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ABCA1O95477 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ABCA1O95477 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 AC004967.1-201ENST00000453589 447 ntBASIC14.97□□□□□ -0.01
ABCA1O95477 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.97□□□□□ -0.01
ABCA1O95477 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
ABCA1O95477 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.97□□□□□ -0.01
ABCA1O95477 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
ABCA1O95477 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
ABCA1O95477 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 CROCCP3-202ENST00000420820 1947 ntBASIC14.97□□□□□ -0.01
ABCA1O95477 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ABCA1O95477 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA1O95477 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
ABCA1O95477 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ABCA1O95477 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
ABCA1O95477 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA1O95477 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA1O95477 AC211486.1-202ENST00000416371 468 ntBASIC14.96□□□□□ -0.01
ABCA1O95477 ABCD1P5-201ENST00000445663 754 ntBASIC14.96□□□□□ -0.01
ABCA1O95477 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA1O95477 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.96□□□□□ -0.01
ABCA1O95477 AC211476.1-201ENST00000503899 468 ntBASIC14.96□□□□□ -0.01
ABCA1O95477 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA1O95477 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA1O95477 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA1O95477 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.96□□□□□ -0.01
ABCA1O95477 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA1O95477 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA1O95477 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms