Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC26.59■■□□□ 1.85
RAPGEF3O95398 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC26.59■■□□□ 1.85
RAPGEF3O95398 AC093484.2-201ENST00000580996 2166 ntBASIC26.59■■□□□ 1.85
RAPGEF3O95398 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC26.59■■□□□ 1.85
RAPGEF3O95398 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RAPGEF3O95398 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
RAPGEF3O95398 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC26.59■■□□□ 1.85
RAPGEF3O95398 KRT8P48-201ENST00000515599 1220 ntBASIC26.59■■□□□ 1.85
RAPGEF3O95398 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC26.59■■□□□ 1.85
RAPGEF3O95398 AC008761.3-201ENST00000624803 892 ntBASIC26.59■■□□□ 1.85
RAPGEF3O95398 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RAPGEF3O95398 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RAPGEF3O95398 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
RAPGEF3O95398 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC26.59■■□□□ 1.85
RAPGEF3O95398 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RAPGEF3O95398 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
RAPGEF3O95398 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
RAPGEF3O95398 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RAPGEF3O95398 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
RAPGEF3O95398 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RAPGEF3O95398 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC26.58■■□□□ 1.85
RAPGEF3O95398 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RAPGEF3O95398 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RAPGEF3O95398 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC26.58■■□□□ 1.85
RAPGEF3O95398 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RAPGEF3O95398 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC26.58■■□□□ 1.85
RAPGEF3O95398 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC26.58■■□□□ 1.85
RAPGEF3O95398 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC26.58■■□□□ 1.85
RAPGEF3O95398 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC26.58■■□□□ 1.85
RAPGEF3O95398 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC26.58■■□□□ 1.85
RAPGEF3O95398 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC26.58■■□□□ 1.85
RAPGEF3O95398 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC26.58■■□□□ 1.85
RAPGEF3O95398 AC019129.2-201ENST00000609837 1235 ntBASIC26.58■■□□□ 1.85
RAPGEF3O95398 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC26.58■■□□□ 1.85
RAPGEF3O95398 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC26.58■■□□□ 1.85
RAPGEF3O95398 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RAPGEF3O95398 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
RAPGEF3O95398 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC26.57■■□□□ 1.84
RAPGEF3O95398 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RAPGEF3O95398 USP39-202ENST00000409025 1946 ntTSL 5 BASIC26.57■■□□□ 1.84
RAPGEF3O95398 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
RAPGEF3O95398 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RAPGEF3O95398 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
RAPGEF3O95398 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
RAPGEF3O95398 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC26.57■■□□□ 1.84
RAPGEF3O95398 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RAPGEF3O95398 DDX43P3-201ENST00000441064 443 ntBASIC26.57■■□□□ 1.84
RAPGEF3O95398 CNN2P2-201ENST00000443536 909 ntBASIC26.57■■□□□ 1.84
RAPGEF3O95398 CNN2P3-201ENST00000450201 906 ntBASIC26.57■■□□□ 1.84
RAPGEF3O95398 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RAPGEF3O95398 GATB-205ENST00000508611 605 ntTSL 2 BASIC26.57■■□□□ 1.84
RAPGEF3O95398 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
RAPGEF3O95398 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC26.57■■□□□ 1.84
RAPGEF3O95398 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RAPGEF3O95398 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC26.57■■□□□ 1.84
RAPGEF3O95398 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC26.57■■□□□ 1.84
RAPGEF3O95398 AL136317.3-201ENST00000618497 906 ntBASIC26.57■■□□□ 1.84
RAPGEF3O95398 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RAPGEF3O95398 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC26.57■■□□□ 1.84
RAPGEF3O95398 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RAPGEF3O95398 BSG-215ENST00000618006 1329 ntTSL 2 BASIC26.57■■□□□ 1.84
RAPGEF3O95398 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
RAPGEF3O95398 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC26.57■■□□□ 1.84
RAPGEF3O95398 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
RAPGEF3O95398 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
RAPGEF3O95398 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
RAPGEF3O95398 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RAPGEF3O95398 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
RAPGEF3O95398 AC097637.2-201ENST00000624096 1997 ntBASIC26.57■■□□□ 1.84
RAPGEF3O95398 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
RAPGEF3O95398 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC26.56■■□□□ 1.84
RAPGEF3O95398 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC26.56■■□□□ 1.84
RAPGEF3O95398 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC26.56■■□□□ 1.84
RAPGEF3O95398 OR8S1-201ENST00000310194 1080 ntBASIC26.56■■□□□ 1.84
RAPGEF3O95398 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC26.56■■□□□ 1.84
RAPGEF3O95398 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
RAPGEF3O95398 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
RAPGEF3O95398 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RAPGEF3O95398 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RAPGEF3O95398 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RAPGEF3O95398 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RAPGEF3O95398 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RAPGEF3O95398 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RAPGEF3O95398 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RAPGEF3O95398 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RAPGEF3O95398 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RAPGEF3O95398 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC26.56■■□□□ 1.84
RAPGEF3O95398 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RAPGEF3O95398 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC26.55■■□□□ 1.84
RAPGEF3O95398 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RAPGEF3O95398 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC26.55■■□□□ 1.84
RAPGEF3O95398 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC26.55■■□□□ 1.84
RAPGEF3O95398 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RAPGEF3O95398 GRAP-202ENST00000395635 834 ntTSL 2 BASIC26.55■■□□□ 1.84
RAPGEF3O95398 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC26.55■■□□□ 1.84
RAPGEF3O95398 FAM58DP-201ENST00000428076 619 ntBASIC26.55■■□□□ 1.84
RAPGEF3O95398 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RAPGEF3O95398 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC26.55■■□□□ 1.84
RAPGEF3O95398 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RAPGEF3O95398 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms