Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.5■□□□□ 0.23
NKX2-2O95096 AC097374.2-201ENST00000618617 1306 ntBASIC16.5■□□□□ 0.23
NKX2-2O95096 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.5■□□□□ 0.23
NKX2-2O95096 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.5■□□□□ 0.23
NKX2-2O95096 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX2-2O95096 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX2-2O95096 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX2-2O95096 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX2-2O95096 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX2-2O95096 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NKX2-2O95096 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX2-2O95096 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX2-2O95096 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX2-2O95096 PCED1CP-201ENST00000419887 785 ntBASIC16.5■□□□□ 0.23
NKX2-2O95096 BX276092.5-203ENST00000456199 560 ntBASIC16.5■□□□□ 0.23
NKX2-2O95096 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.5■□□□□ 0.23
NKX2-2O95096 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.5■□□□□ 0.23
NKX2-2O95096 IGHV3-41-201ENST00000613121 348 ntBASIC16.5■□□□□ 0.23
NKX2-2O95096 AC124864.1-201ENST00000623408 392 ntBASIC16.5■□□□□ 0.23
NKX2-2O95096 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX2-2O95096 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.5■□□□□ 0.23
NKX2-2O95096 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.5■□□□□ 0.23
NKX2-2O95096 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX2-2O95096 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX2-2O95096 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX2-2O95096 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX2-2O95096 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NKX2-2O95096 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX2-2O95096 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX2-2O95096 AL355312.1-201ENST00000407115 2176 ntBASIC16.5■□□□□ 0.23
NKX2-2O95096 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX2-2O95096 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX2-2O95096 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
NKX2-2O95096 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX2-2O95096 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX2-2O95096 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX2-2O95096 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX2-2O95096 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX2-2O95096 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NKX2-2O95096 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX2-2O95096 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX2-2O95096 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX2-2O95096 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
NKX2-2O95096 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX2-2O95096 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NKX2-2O95096 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.49■□□□□ 0.23
NKX2-2O95096 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX2-2O95096 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX2-2O95096 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NKX2-2O95096 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NKX2-2O95096 LINC00304-203ENST00000565008 1864 ntBASIC16.49■□□□□ 0.23
NKX2-2O95096 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.49■□□□□ 0.23
NKX2-2O95096 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.49■□□□□ 0.23
NKX2-2O95096 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NKX2-2O95096 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NKX2-2O95096 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
NKX2-2O95096 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
NKX2-2O95096 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX2-2O95096 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX2-2O95096 AC133963.1-201ENST00000504166 1679 ntBASIC16.49■□□□□ 0.23
NKX2-2O95096 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NKX2-2O95096 BX276092.7-203ENST00000637198 1536 ntBASIC16.49■□□□□ 0.23
NKX2-2O95096 AC016734.2-201ENST00000624325 1377 ntBASIC16.49■□□□□ 0.23
NKX2-2O95096 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.49■□□□□ 0.23
NKX2-2O95096 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NKX2-2O95096 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX2-2O95096 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NKX2-2O95096 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NKX2-2O95096 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.48■□□□□ 0.23
NKX2-2O95096 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NKX2-2O95096 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.48■□□□□ 0.23
NKX2-2O95096 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX2-2O95096 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.48■□□□□ 0.23
NKX2-2O95096 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.48■□□□□ 0.23
NKX2-2O95096 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX2-2O95096 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX2-2O95096 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.48■□□□□ 0.23
NKX2-2O95096 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.48■□□□□ 0.23
NKX2-2O95096 AL845331.1-201ENST00000424978 1190 ntBASIC16.48■□□□□ 0.23
NKX2-2O95096 CHCHD2P8-201ENST00000429873 447 ntBASIC16.48■□□□□ 0.23
NKX2-2O95096 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX2-2O95096 KRT18P35-201ENST00000510488 1269 ntBASIC16.48■□□□□ 0.23
NKX2-2O95096 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.48■□□□□ 0.23
NKX2-2O95096 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
NKX2-2O95096 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NKX2-2O95096 LINC01451-201ENST00000623792 534 ntBASIC16.48■□□□□ 0.23
NKX2-2O95096 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX2-2O95096 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.48■□□□□ 0.23
NKX2-2O95096 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NKX2-2O95096 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NKX2-2O95096 REXO1L11P-201ENST00000620964 1927 ntBASIC16.48■□□□□ 0.23
NKX2-2O95096 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX2-2O95096 IER3-202ENST00000376377 1350 ntBASIC16.48■□□□□ 0.23
NKX2-2O95096 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NKX2-2O95096 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX2-2O95096 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.48■□□□□ 0.23
NKX2-2O95096 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NKX2-2O95096 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX2-2O95096 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.48■□□□□ 0.23
NKX2-2O95096 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms