Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
NDUFS4O43181 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.14■□□□□ 0.33
NDUFS4O43181 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NDUFS4O43181 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.14■□□□□ 0.33
NDUFS4O43181 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS4O43181 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS4O43181 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS4O43181 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS4O43181 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NDUFS4O43181 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS4O43181 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS4O43181 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS4O43181 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS4O43181 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS4O43181 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS4O43181 UPK3BP1-201ENST00000428678 509 ntBASIC17.14■□□□□ 0.33
NDUFS4O43181 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.14■□□□□ 0.33
NDUFS4O43181 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NDUFS4O43181 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.14■□□□□ 0.33
NDUFS4O43181 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS4O43181 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.14■□□□□ 0.33
NDUFS4O43181 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
NDUFS4O43181 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
NDUFS4O43181 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NDUFS4O43181 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS4O43181 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS4O43181 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.14■□□□□ 0.33
NDUFS4O43181 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS4O43181 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFS4O43181 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.14■□□□□ 0.33
NDUFS4O43181 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.14■□□□□ 0.33
NDUFS4O43181 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.14■□□□□ 0.33
NDUFS4O43181 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.14■□□□□ 0.33
NDUFS4O43181 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.13■□□□□ 0.33
NDUFS4O43181 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.13■□□□□ 0.33
NDUFS4O43181 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NDUFS4O43181 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NDUFS4O43181 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NDUFS4O43181 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NDUFS4O43181 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NDUFS4O43181 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NDUFS4O43181 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.13■□□□□ 0.33
NDUFS4O43181 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 MTCL1P1-201ENST00000446207 792 ntBASIC17.13■□□□□ 0.33
NDUFS4O43181 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 AC068472.1-201ENST00000474589 881 ntBASIC17.13■□□□□ 0.33
NDUFS4O43181 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.13■□□□□ 0.33
NDUFS4O43181 AC112698.1-201ENST00000510299 916 ntBASIC17.13■□□□□ 0.33
NDUFS4O43181 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NDUFS4O43181 KRT18P1-202ENST00000452408 1331 ntBASIC17.13■□□□□ 0.33
NDUFS4O43181 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFS4O43181 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
NDUFS4O43181 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NDUFS4O43181 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
NDUFS4O43181 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS4O43181 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS4O43181 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS4O43181 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFS4O43181 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS4O43181 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS4O43181 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFS4O43181 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NDUFS4O43181 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NDUFS4O43181 AP002414.4-201ENST00000589764 1148 ntBASIC17.12■□□□□ 0.33
NDUFS4O43181 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFS4O43181 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFS4O43181 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS4O43181 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS4O43181 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
NDUFS4O43181 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS4O43181 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
NDUFS4O43181 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS4O43181 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS4O43181 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS4O43181 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS4O43181 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS4O43181 GNAS-203ENST00000306120 1878 ntBASIC17.12■□□□□ 0.33
NDUFS4O43181 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.12■□□□□ 0.33
NDUFS4O43181 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFS4O43181 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms