Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.23■□□□□ 0.67
TNRC18O15417 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.23■□□□□ 0.67
TNRC18O15417 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.23■□□□□ 0.67
TNRC18O15417 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.23■□□□□ 0.67
TNRC18O15417 AL138828.2-201ENST00000615812 383 ntBASIC19.23■□□□□ 0.67
TNRC18O15417 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TNRC18O15417 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNRC18O15417 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNRC18O15417 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNRC18O15417 PTCHD3P3-201ENST00000403073 906 ntBASIC19.23■□□□□ 0.67
TNRC18O15417 KLF4P1-201ENST00000412782 1185 ntBASIC19.23■□□□□ 0.67
TNRC18O15417 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.23■□□□□ 0.67
TNRC18O15417 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNRC18O15417 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNRC18O15417 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.23■□□□□ 0.67
TNRC18O15417 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TNRC18O15417 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNRC18O15417 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.23■□□□□ 0.67
TNRC18O15417 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.23■□□□□ 0.67
TNRC18O15417 AC122714.2-201ENST00000502787 707 ntBASIC19.23■□□□□ 0.67
TNRC18O15417 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.23■□□□□ 0.67
TNRC18O15417 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TNRC18O15417 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNRC18O15417 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNRC18O15417 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
TNRC18O15417 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TNRC18O15417 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNRC18O15417 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNRC18O15417 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNRC18O15417 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNRC18O15417 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TNRC18O15417 AL353779.1-201ENST00000434793 351 ntBASIC19.22■□□□□ 0.67
TNRC18O15417 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.22■□□□□ 0.67
TNRC18O15417 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.22■□□□□ 0.67
TNRC18O15417 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNRC18O15417 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TNRC18O15417 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.22■□□□□ 0.67
TNRC18O15417 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.22■□□□□ 0.67
TNRC18O15417 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNRC18O15417 AC007541.1-201ENST00000570282 1469 ntBASIC19.22■□□□□ 0.67
TNRC18O15417 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNRC18O15417 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNRC18O15417 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TNRC18O15417 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TNRC18O15417 ACTBP11-201ENST00000436287 1126 ntBASIC19.22■□□□□ 0.67
TNRC18O15417 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNRC18O15417 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.22■□□□□ 0.67
TNRC18O15417 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.22■□□□□ 0.67
TNRC18O15417 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNRC18O15417 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNRC18O15417 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.22■□□□□ 0.67
TNRC18O15417 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.21■□□□□ 0.67
TNRC18O15417 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TNRC18O15417 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNRC18O15417 AC096633.1-201ENST00000422446 749 ntBASIC19.21■□□□□ 0.67
TNRC18O15417 SPCS2P4-201ENST00000436160 681 ntBASIC19.21■□□□□ 0.67
TNRC18O15417 AL583810.1-201ENST00000553344 1045 ntBASIC19.21■□□□□ 0.67
TNRC18O15417 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.21■□□□□ 0.67
TNRC18O15417 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.21■□□□□ 0.67
TNRC18O15417 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.21■□□□□ 0.67
TNRC18O15417 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.21■□□□□ 0.67
TNRC18O15417 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
TNRC18O15417 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNRC18O15417 AP006294.1-201ENST00000415407 339 ntBASIC19.21■□□□□ 0.67
TNRC18O15417 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNRC18O15417 FAM185BP-201ENST00000443595 716 ntBASIC19.21■□□□□ 0.67
TNRC18O15417 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNRC18O15417 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.21■□□□□ 0.67
TNRC18O15417 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.21■□□□□ 0.67
TNRC18O15417 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNRC18O15417 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNRC18O15417 ACTL9-202ENST00000612068 1252 ntBASIC19.2■□□□□ 0.66
TNRC18O15417 MIR6775-201ENST00000617557 69 ntBASIC19.2■□□□□ 0.66
TNRC18O15417 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.2■□□□□ 0.66
TNRC18O15417 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNRC18O15417 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNRC18O15417 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TNRC18O15417 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNRC18O15417 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNRC18O15417 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNRC18O15417 KRT223P-202ENST00000449164 1292 ntBASIC19.2■□□□□ 0.66
TNRC18O15417 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.2■□□□□ 0.66
TNRC18O15417 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.2■□□□□ 0.66
TNRC18O15417 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TNRC18O15417 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNRC18O15417 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNRC18O15417 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNRC18O15417 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNRC18O15417 SIRPAP1-201ENST00000448467 1770 ntBASIC19.2■□□□□ 0.66
TNRC18O15417 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNRC18O15417 AC009102.3-201ENST00000623118 1491 ntBASIC19.2■□□□□ 0.66
TNRC18O15417 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNRC18O15417 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNRC18O15417 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.2■□□□□ 0.66
TNRC18O15417 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.2■□□□□ 0.66
TNRC18O15417 AL590560.3-201ENST00000623350 461 ntBASIC19.2■□□□□ 0.66
TNRC18O15417 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TNRC18O15417 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.2■□□□□ 0.66
TNRC18O15417 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TNRC18O15417 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms