Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MID1O15344 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MID1O15344 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MID1O15344 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MID1O15344 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MID1O15344 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MID1O15344 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
MID1O15344 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.87■□□□□ 0.45
MID1O15344 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MID1O15344 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.87■□□□□ 0.45
MID1O15344 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.87■□□□□ 0.45
MID1O15344 RPS2P1-201ENST00000434010 821 ntBASIC17.87■□□□□ 0.45
MID1O15344 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.87■□□□□ 0.45
MID1O15344 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MID1O15344 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.87■□□□□ 0.45
MID1O15344 AC139887.3-201ENST00000568585 713 ntBASIC17.87■□□□□ 0.45
MID1O15344 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.87■□□□□ 0.45
MID1O15344 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
MID1O15344 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.87■□□□□ 0.45
MID1O15344 AP000867.4-201ENST00000641616 219 ntBASIC17.87■□□□□ 0.45
MID1O15344 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
MID1O15344 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MID1O15344 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MID1O15344 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.87■□□□□ 0.45
MID1O15344 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.87■□□□□ 0.45
MID1O15344 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.87■□□□□ 0.45
MID1O15344 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.87■□□□□ 0.45
MID1O15344 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.87■□□□□ 0.45
MID1O15344 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MID1O15344 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
MID1O15344 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
MID1O15344 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
MID1O15344 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MID1O15344 AC135776.1-201ENST00000319817 2481 ntBASIC17.87■□□□□ 0.45
MID1O15344 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MID1O15344 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MID1O15344 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
MID1O15344 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
MID1O15344 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
MID1O15344 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
MID1O15344 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 RPS2P28-201ENST00000314255 741 ntBASIC17.86■□□□□ 0.45
MID1O15344 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MID1O15344 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.86■□□□□ 0.45
MID1O15344 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MID1O15344 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.86■□□□□ 0.45
MID1O15344 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.86■□□□□ 0.45
MID1O15344 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.86■□□□□ 0.45
MID1O15344 NKAPP1-205ENST00000585790 367 ntBASIC17.86■□□□□ 0.45
MID1O15344 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.86■□□□□ 0.45
MID1O15344 AL139288.1-201ENST00000623748 933 ntBASIC17.86■□□□□ 0.45
MID1O15344 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
MID1O15344 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.86■□□□□ 0.45
MID1O15344 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
MID1O15344 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.86■□□□□ 0.45
MID1O15344 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.86■□□□□ 0.45
MID1O15344 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.86■□□□□ 0.45
MID1O15344 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
MID1O15344 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MID1O15344 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.85■□□□□ 0.45
MID1O15344 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.85■□□□□ 0.45
MID1O15344 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
MID1O15344 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
MID1O15344 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
MID1O15344 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MID1O15344 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.85■□□□□ 0.45
MID1O15344 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MID1O15344 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MID1O15344 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MID1O15344 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MID1O15344 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MID1O15344 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MID1O15344 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MID1O15344 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
MID1O15344 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MID1O15344 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MID1O15344 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MID1O15344 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.85■□□□□ 0.45
MID1O15344 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
MID1O15344 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
MID1O15344 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MID1O15344 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.85■□□□□ 0.45
MID1O15344 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms