Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SURF4O15260 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SURF4O15260 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SURF4O15260 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.17■□□□□ 0.18
SURF4O15260 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.17■□□□□ 0.18
SURF4O15260 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.17■□□□□ 0.18
SURF4O15260 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SURF4O15260 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
SURF4O15260 HLA-J-201ENST00000462773 1622 ntBASIC16.17■□□□□ 0.18
SURF4O15260 AL121761.2-201ENST00000598007 1648 ntBASIC16.17■□□□□ 0.18
SURF4O15260 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.17■□□□□ 0.18
SURF4O15260 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.17■□□□□ 0.18
SURF4O15260 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.17■□□□□ 0.18
SURF4O15260 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SURF4O15260 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.17■□□□□ 0.18
SURF4O15260 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SURF4O15260 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
SURF4O15260 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.17■□□□□ 0.18
SURF4O15260 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.17■□□□□ 0.18
SURF4O15260 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SURF4O15260 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SURF4O15260 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SURF4O15260 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.16■□□□□ 0.18
SURF4O15260 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
SURF4O15260 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SURF4O15260 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SURF4O15260 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SURF4O15260 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SURF4O15260 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SURF4O15260 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SURF4O15260 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SURF4O15260 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SURF4O15260 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SURF4O15260 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SURF4O15260 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SURF4O15260 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SURF4O15260 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.16■□□□□ 0.18
SURF4O15260 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SURF4O15260 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
SURF4O15260 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SURF4O15260 AC007663.1-201ENST00000438948 1240 ntBASIC16.16■□□□□ 0.18
SURF4O15260 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SURF4O15260 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.16■□□□□ 0.18
SURF4O15260 AC128688.1-201ENST00000487626 519 ntBASIC16.16■□□□□ 0.18
SURF4O15260 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.16■□□□□ 0.18
SURF4O15260 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
SURF4O15260 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SURF4O15260 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SURF4O15260 AC116562.4-202ENST00000641738 218 ntBASIC16.16■□□□□ 0.18
SURF4O15260 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.16■□□□□ 0.18
SURF4O15260 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SURF4O15260 LINC00167-201ENST00000530583 1419 ntBASIC16.16■□□□□ 0.18
SURF4O15260 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SURF4O15260 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SURF4O15260 NKILA-202ENST00000614771 2598 ntBASIC16.16■□□□□ 0.18
SURF4O15260 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SURF4O15260 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SURF4O15260 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.15■□□□□ 0.18
SURF4O15260 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.15■□□□□ 0.18
SURF4O15260 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SURF4O15260 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SURF4O15260 AC124067.4-201ENST00000519691 2379 ntBASIC16.15■□□□□ 0.18
SURF4O15260 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SURF4O15260 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.15■□□□□ 0.18
SURF4O15260 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SURF4O15260 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SURF4O15260 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.15■□□□□ 0.18
SURF4O15260 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SURF4O15260 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SURF4O15260 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SURF4O15260 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SURF4O15260 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SURF4O15260 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SURF4O15260 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SURF4O15260 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.15■□□□□ 0.18
SURF4O15260 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.15■□□□□ 0.18
SURF4O15260 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.15■□□□□ 0.18
SURF4O15260 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SURF4O15260 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms