Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 AC128676.1-201ENST00000454392 318 ntBASIC12.27□□□□□ -0.45
NDUFA1O15239 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.27□□□□□ -0.45
NDUFA1O15239 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC12.27□□□□□ -0.45
NDUFA1O15239 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.27□□□□□ -0.45
NDUFA1O15239 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC12.27□□□□□ -0.45
NDUFA1O15239 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.27□□□□□ -0.45
NDUFA1O15239 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12.27□□□□□ -0.45
NDUFA1O15239 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.27□□□□□ -0.45
NDUFA1O15239 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC12.27□□□□□ -0.45
NDUFA1O15239 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC12.27□□□□□ -0.45
NDUFA1O15239 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
NDUFA1O15239 AL135905.2-201ENST00000584934 1404 ntBASIC12.27□□□□□ -0.45
NDUFA1O15239 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
NDUFA1O15239 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
NDUFA1O15239 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
NDUFA1O15239 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.27□□□□□ -0.45
NDUFA1O15239 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
NDUFA1O15239 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.26□□□□□ -0.45
NDUFA1O15239 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
NDUFA1O15239 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC12.26□□□□□ -0.45
NDUFA1O15239 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC12.26□□□□□ -0.45
NDUFA1O15239 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
NDUFA1O15239 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 AL139384.1-201ENST00000612143 3047 ntBASIC12.26□□□□□ -0.45
NDUFA1O15239 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC12.26□□□□□ -0.45
NDUFA1O15239 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC12.26□□□□□ -0.45
NDUFA1O15239 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.26□□□□□ -0.45
NDUFA1O15239 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.26□□□□□ -0.45
NDUFA1O15239 AF186192.3-201ENST00000583427 947 ntBASIC12.26□□□□□ -0.45
NDUFA1O15239 RPS15-203ENST00000586096 570 ntTSL 2 BASIC12.26□□□□□ -0.45
NDUFA1O15239 MIR6786-201ENST00000616843 113 ntBASIC12.26□□□□□ -0.45
NDUFA1O15239 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 ABBA01031674.1-201ENST00000635145 728 ntBASIC12.26□□□□□ -0.45
NDUFA1O15239 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.26□□□□□ -0.45
NDUFA1O15239 BOC-212ENST00000485230 2173 ntTSL 2 BASIC12.26□□□□□ -0.45
NDUFA1O15239 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC12.26□□□□□ -0.45
NDUFA1O15239 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC12.26□□□□□ -0.45
NDUFA1O15239 FSCN1P1-201ENST00000568912 1481 ntBASIC12.26□□□□□ -0.45
NDUFA1O15239 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.26□□□□□ -0.45
NDUFA1O15239 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.26□□□□□ -0.45
NDUFA1O15239 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFA1O15239 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFA1O15239 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC12.25□□□□□ -0.45
NDUFA1O15239 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFA1O15239 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFA1O15239 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFA1O15239 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFA1O15239 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFA1O15239 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFA1O15239 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFA1O15239 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.25□□□□□ -0.45
NDUFA1O15239 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
NDUFA1O15239 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFA1O15239 AL355312.1-201ENST00000407115 2176 ntBASIC12.25□□□□□ -0.45
NDUFA1O15239 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC12.25□□□□□ -0.45
NDUFA1O15239 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.25□□□□□ -0.45
NDUFA1O15239 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFA1O15239 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
NDUFA1O15239 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
NDUFA1O15239 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms