Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC28.67■■■□□ 2.18
CHD1O14646 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CHD1O14646 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
CHD1O14646 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC28.66■■■□□ 2.18
CHD1O14646 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC28.66■■■□□ 2.18
CHD1O14646 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC28.66■■■□□ 2.18
CHD1O14646 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC28.66■■■□□ 2.18
CHD1O14646 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC28.66■■■□□ 2.18
CHD1O14646 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
CHD1O14646 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CHD1O14646 NME2P1-201ENST00000426182 414 ntBASIC28.66■■■□□ 2.18
CHD1O14646 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC28.66■■■□□ 2.18
CHD1O14646 AL662799.1-202ENST00000614205 422 ntBASIC28.66■■■□□ 2.18
CHD1O14646 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CHD1O14646 AC008677.1-201ENST00000519230 1561 ntBASIC28.65■■■□□ 2.18
CHD1O14646 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CHD1O14646 POLI-202ENST00000406285 2030 ntTSL 2 BASIC28.65■■■□□ 2.18
CHD1O14646 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC28.65■■■□□ 2.18
CHD1O14646 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CHD1O14646 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CHD1O14646 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
CHD1O14646 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CHD1O14646 CD81-202ENST00000381036 880 ntTSL 3 BASIC28.65■■■□□ 2.18
CHD1O14646 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
CHD1O14646 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC28.65■■■□□ 2.18
CHD1O14646 PPP6R2P1-201ENST00000450880 1275 ntBASIC28.65■■■□□ 2.18
CHD1O14646 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC28.65■■■□□ 2.18
CHD1O14646 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC28.65■■■□□ 2.18
CHD1O14646 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
CHD1O14646 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC28.65■■■□□ 2.18
CHD1O14646 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC28.65■■■□□ 2.18
CHD1O14646 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
CHD1O14646 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CHD1O14646 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC28.64■■■□□ 2.18
CHD1O14646 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CHD1O14646 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CHD1O14646 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC28.64■■■□□ 2.18
CHD1O14646 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CHD1O14646 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC28.64■■■□□ 2.18
CHD1O14646 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC28.64■■■□□ 2.18
CHD1O14646 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC28.64■■■□□ 2.18
CHD1O14646 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC28.64■■■□□ 2.18
CHD1O14646 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
CHD1O14646 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
CHD1O14646 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.17
CHD1O14646 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CHD1O14646 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC28.63■■■□□ 2.17
CHD1O14646 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC28.63■■■□□ 2.17
CHD1O14646 THTPA-204ENST00000554970 569 ntTSL 4 BASIC28.63■■■□□ 2.17
CHD1O14646 THTPA-206ENST00000556015 535 ntTSL 3 BASIC28.63■■■□□ 2.17
CHD1O14646 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC28.63■■■□□ 2.17
CHD1O14646 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC28.63■■■□□ 2.17
CHD1O14646 AC027307.3-201ENST00000594262 1100 ntBASIC28.63■■■□□ 2.17
CHD1O14646 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CHD1O14646 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC28.63■■■□□ 2.17
CHD1O14646 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CHD1O14646 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC28.63■■■□□ 2.17
CHD1O14646 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC28.63■■■□□ 2.17
CHD1O14646 AC002056.1-201ENST00000395613 760 ntBASIC28.63■■■□□ 2.17
CHD1O14646 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC28.63■■■□□ 2.17
CHD1O14646 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC28.63■■■□□ 2.17
CHD1O14646 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC28.63■■■□□ 2.17
CHD1O14646 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC28.63■■■□□ 2.17
CHD1O14646 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
CHD1O14646 BSG-214ENST00000614867 960 ntTSL 3 BASIC28.63■■■□□ 2.17
CHD1O14646 RAB34-224ENST00000636513 888 ntTSL 5 BASIC28.63■■■□□ 2.17
CHD1O14646 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC28.62■■■□□ 2.17
CHD1O14646 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CHD1O14646 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC28.62■■■□□ 2.17
CHD1O14646 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CHD1O14646 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC28.62■■■□□ 2.17
CHD1O14646 AL590787.1-201ENST00000568856 1315 ntBASIC28.62■■■□□ 2.17
CHD1O14646 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
CHD1O14646 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
CHD1O14646 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
CHD1O14646 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
CHD1O14646 AC018445.3-201ENST00000624177 1945 ntBASIC28.62■■■□□ 2.17
CHD1O14646 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CHD1O14646 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CHD1O14646 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CHD1O14646 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC28.62■■■□□ 2.17
CHD1O14646 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
CHD1O14646 STK19B-204ENST00000512515 211 ntBASIC28.62■■■□□ 2.17
CHD1O14646 AC243562.1-201ENST00000560672 389 ntBASIC28.62■■■□□ 2.17
CHD1O14646 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC28.62■■■□□ 2.17
CHD1O14646 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC28.62■■■□□ 2.17
CHD1O14646 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CHD1O14646 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CHD1O14646 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CHD1O14646 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
CHD1O14646 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CHD1O14646 AC009336.1-201ENST00000608941 1553 ntBASIC28.61■■■□□ 2.17
CHD1O14646 RBPMS2P1-201ENST00000437762 623 ntBASIC28.61■■■□□ 2.17
CHD1O14646 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CHD1O14646 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC28.61■■■□□ 2.17
CHD1O14646 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC28.61■■■□□ 2.17
CHD1O14646 INO80E-210ENST00000567705 880 ntTSL 3 BASIC28.61■■■□□ 2.17
CHD1O14646 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CHD1O14646 AL158211.5-201ENST00000623583 2518 ntBASIC28.61■■■□□ 2.17
CHD1O14646 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC28.61■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms